Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHL35854.1 | SHL35891.1 | SAMN05444387_0401 | SAMN05444387_0402 | Hypothetical protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.872 |
SHL35854.1 | SHL35926.1 | SAMN05444387_0401 | SAMN05444387_0403 | Hypothetical protein. | Protein of unknown function. | 0.741 |
SHL35854.1 | SHL38092.1 | SAMN05444387_0401 | SAMN05444387_0456 | Hypothetical protein. | Hypothetical protein. | 0.708 |
SHL35854.1 | SHL96906.1 | SAMN05444387_0401 | SAMN05444387_1578 | Hypothetical protein. | Hypothetical protein. | 0.725 |
SHL35854.1 | SHM05283.1 | SAMN05444387_0401 | SAMN05444387_1798 | Hypothetical protein. | Aspartyl protease. | 0.725 |
SHL35854.1 | SHM56240.1 | SAMN05444387_0401 | SAMN05444387_2819 | Hypothetical protein. | Hypothetical protein. | 0.736 |
SHL35854.1 | SHM75541.1 | SAMN05444387_0401 | SAMN05444387_3105 | Hypothetical protein. | Hypothetical protein. | 0.743 |
SHL35854.1 | SHM84027.1 | SAMN05444387_0401 | SAMN05444387_3372 | Hypothetical protein. | Protein of unknown function. | 0.708 |
SHL35854.1 | SHM93306.1 | SAMN05444387_0401 | SAMN05444387_3483 | Hypothetical protein. | Type IX secretion system membrane protein, PorP/SprF family. | 0.727 |
SHL35854.1 | SHN06976.1 | SAMN05444387_0401 | SAMN05444387_3951 | Hypothetical protein. | Putative DNA-binding domain-containing protein. | 0.744 |
SHL35891.1 | SHL35854.1 | SAMN05444387_0402 | SAMN05444387_0401 | RNA polymerase sigma-70 factor, ECF subfamily. | Hypothetical protein. | 0.872 |
SHL35891.1 | SHL35926.1 | SAMN05444387_0402 | SAMN05444387_0403 | RNA polymerase sigma-70 factor, ECF subfamily. | Protein of unknown function. | 0.585 |
SHL35926.1 | SHL35854.1 | SAMN05444387_0403 | SAMN05444387_0401 | Protein of unknown function. | Hypothetical protein. | 0.741 |
SHL35926.1 | SHL35891.1 | SAMN05444387_0403 | SAMN05444387_0402 | Protein of unknown function. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.585 |
SHL35926.1 | SHL96906.1 | SAMN05444387_0403 | SAMN05444387_1578 | Protein of unknown function. | Hypothetical protein. | 0.475 |
SHL35926.1 | SHM05283.1 | SAMN05444387_0403 | SAMN05444387_1798 | Protein of unknown function. | Aspartyl protease. | 0.495 |
SHL35926.1 | SHM56240.1 | SAMN05444387_0403 | SAMN05444387_2819 | Protein of unknown function. | Hypothetical protein. | 0.495 |
SHL35926.1 | SHM75541.1 | SAMN05444387_0403 | SAMN05444387_3105 | Protein of unknown function. | Hypothetical protein. | 0.544 |
SHL35926.1 | SHM84027.1 | SAMN05444387_0403 | SAMN05444387_3372 | Protein of unknown function. | Protein of unknown function. | 0.552 |
SHL35926.1 | SHN06976.1 | SAMN05444387_0403 | SAMN05444387_3951 | Protein of unknown function. | Putative DNA-binding domain-containing protein. | 0.581 |
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