STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL62160.1Flavodoxin. (209 aa)    
Predicted Functional Partners:
SHL62218.1
Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family.
 
     0.872
SHL62075.1
Aldo/keto reductase.
 
     0.839
SHL62258.1
Cupin domain protein.
 
     0.828
SHL62117.1
Predicted oxidoreductase.
 
     0.810
SHM15125.1
Sulfite reductase (ferredoxin).
     
 0.716
SHL62030.1
Helix-turn-helix domain-containing protein.
 
    0.630
SHL62294.1
NUDIX domain-containing protein.
       0.606
SHL58774.1
Sulfite reductase (NADPH) flavoprotein alpha-component.
    
  0.582
SHM53660.1
cob(I)alamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
     
 0.542
SHN22377.1
Amino acid adenylation domain-containing protein.
   
   0.524
Your Current Organism:
Flavobacterium pectinovorum
NCBI taxonomy Id: 29533
Other names: ATCC 19366, CIP 104742, Cytophaga pectinovora, DSM 6368, Empedobacter pectinovorum, F. pectinovorum, Flavibacterium pectinovorum, IFO 15945, JCM 8518, LMG 4031, LMG:4031, NBRC 15945, NCIMB 9059, strain number 81 Dorey
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.