Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHL22729.1 | SHL23720.1 | SAMN05444387_0078 | SAMN05444387_0103 | Signal transduction histidine kinase. | Two component regulator propeller. | 0.981 |
SHL22729.1 | SHL24278.1 | SAMN05444387_0078 | SAMN05444387_0116 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.982 |
SHL22729.1 | SHL53364.1 | SAMN05444387_0078 | SAMN05444387_0833 | Signal transduction histidine kinase. | Hypothetical protein. | 0.999 |
SHL22729.1 | SHL54460.1 | SAMN05444387_0078 | SAMN05444387_0865 | Signal transduction histidine kinase. | Two-component system, chemotaxis family, CheB/CheR fusion protein. | 0.999 |
SHL22729.1 | SHL58676.1 | SAMN05444387_0078 | SAMN05444387_0999 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.999 |
SHL22729.1 | SHL91975.1 | SAMN05444387_0078 | SAMN05444387_1443 | Signal transduction histidine kinase. | PAS domain S-box-containing protein. | 0.739 |
SHL22729.1 | SHM43157.1 | SAMN05444387_0078 | SAMN05444387_2476 | Signal transduction histidine kinase. | PAS domain S-box-containing protein. | 0.999 |
SHL22729.1 | SHN14134.1 | SAMN05444387_0078 | SAMN05444387_4272 | Signal transduction histidine kinase. | Monosaccharide ABC transporter substrate-binding protein, CUT2 family. | 0.999 |
SHL22729.1 | SHN14332.1 | SAMN05444387_0078 | SAMN05444387_4293 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.981 |
SHL22729.1 | SHN14433.1 | SAMN05444387_0078 | SAMN05444387_4302 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.982 |
SHL23720.1 | SHL22729.1 | SAMN05444387_0103 | SAMN05444387_0078 | Two component regulator propeller. | Signal transduction histidine kinase. | 0.981 |
SHL23720.1 | SHL24278.1 | SAMN05444387_0103 | SAMN05444387_0116 | Two component regulator propeller. | Signal transduction histidine kinase. | 0.982 |
SHL23720.1 | SHL53364.1 | SAMN05444387_0103 | SAMN05444387_0833 | Two component regulator propeller. | Hypothetical protein. | 0.999 |
SHL23720.1 | SHL54460.1 | SAMN05444387_0103 | SAMN05444387_0865 | Two component regulator propeller. | Two-component system, chemotaxis family, CheB/CheR fusion protein. | 0.999 |
SHL23720.1 | SHL58676.1 | SAMN05444387_0103 | SAMN05444387_0999 | Two component regulator propeller. | Signal transduction histidine kinase. | 0.999 |
SHL23720.1 | SHL91975.1 | SAMN05444387_0103 | SAMN05444387_1443 | Two component regulator propeller. | PAS domain S-box-containing protein. | 0.739 |
SHL23720.1 | SHM43157.1 | SAMN05444387_0103 | SAMN05444387_2476 | Two component regulator propeller. | PAS domain S-box-containing protein. | 0.999 |
SHL23720.1 | SHN14134.1 | SAMN05444387_0103 | SAMN05444387_4272 | Two component regulator propeller. | Monosaccharide ABC transporter substrate-binding protein, CUT2 family. | 0.999 |
SHL23720.1 | SHN14332.1 | SAMN05444387_0103 | SAMN05444387_4293 | Two component regulator propeller. | Signal transduction histidine kinase. | 0.982 |
SHL23720.1 | SHN14433.1 | SAMN05444387_0103 | SAMN05444387_4302 | Two component regulator propeller. | Signal transduction histidine kinase. | 0.977 |
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