Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHL92668.1 | SHL92713.1 | SAMN05444387_1460 | SAMN05444387_1461 | Putative bacilliredoxin, YphP/YqiW family; Belongs to the UPF0403 family. | DNA-binding transcriptional regulator, ArsR family. | 0.465 |
SHL92668.1 | SHN10175.1 | SAMN05444387_1460 | SAMN05444387_4097 | Putative bacilliredoxin, YphP/YqiW family; Belongs to the UPF0403 family. | Thioredoxin. | 0.487 |
SHL92668.1 | SHN11348.1 | SAMN05444387_1460 | SAMN05444387_4186 | Putative bacilliredoxin, YphP/YqiW family; Belongs to the UPF0403 family. | DinB superfamily protein. | 0.548 |
SHL92668.1 | SHN20715.1 | SAMN05444387_1460 | SAMN05444387_4683 | Putative bacilliredoxin, YphP/YqiW family; Belongs to the UPF0403 family. | DinB superfamily protein. | 0.573 |
SHL92668.1 | SHN21541.1 | SAMN05444387_1460 | SAMN05444387_4722 | Putative bacilliredoxin, YphP/YqiW family; Belongs to the UPF0403 family. | Protein of unknown function. | 0.562 |
SHL92668.1 | bshA | SAMN05444387_1460 | SAMN05444387_2295 | Putative bacilliredoxin, YphP/YqiW family; Belongs to the UPF0403 family. | N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA. | 0.765 |
SHL92668.1 | bshB1 | SAMN05444387_1460 | SAMN05444387_2479 | Putative bacilliredoxin, YphP/YqiW family; Belongs to the UPF0403 family. | Bacillithiol biosynthesis deacetylase BshB1. | 0.671 |
SHL92668.1 | bshC | SAMN05444387_1460 | SAMN05444387_2709 | Putative bacilliredoxin, YphP/YqiW family; Belongs to the UPF0403 family. | Bacillithiol biosynthesis cysteine-adding enzyme BshC; Belongs to the BshC family. | 0.784 |
SHL92668.1 | ypdA | SAMN05444387_1460 | SAMN05444387_4668 | Putative bacilliredoxin, YphP/YqiW family; Belongs to the UPF0403 family. | Thioredoxin reductase (NADPH)/hypothetical protein. | 0.686 |
SHL92668.1 | ytxJ | SAMN05444387_1460 | SAMN05444387_0759 | Putative bacilliredoxin, YphP/YqiW family; Belongs to the UPF0403 family. | Bacillithiol system protein YtxJ. | 0.706 |
SHL92713.1 | SHL92668.1 | SAMN05444387_1461 | SAMN05444387_1460 | DNA-binding transcriptional regulator, ArsR family. | Putative bacilliredoxin, YphP/YqiW family; Belongs to the UPF0403 family. | 0.465 |
SHN10175.1 | SHL92668.1 | SAMN05444387_4097 | SAMN05444387_1460 | Thioredoxin. | Putative bacilliredoxin, YphP/YqiW family; Belongs to the UPF0403 family. | 0.487 |
SHN10175.1 | bshC | SAMN05444387_4097 | SAMN05444387_2709 | Thioredoxin. | Bacillithiol biosynthesis cysteine-adding enzyme BshC; Belongs to the BshC family. | 0.456 |
SHN10175.1 | ypdA | SAMN05444387_4097 | SAMN05444387_4668 | Thioredoxin. | Thioredoxin reductase (NADPH)/hypothetical protein. | 0.478 |
SHN11348.1 | SHL92668.1 | SAMN05444387_4186 | SAMN05444387_1460 | DinB superfamily protein. | Putative bacilliredoxin, YphP/YqiW family; Belongs to the UPF0403 family. | 0.548 |
SHN11348.1 | SHN20715.1 | SAMN05444387_4186 | SAMN05444387_4683 | DinB superfamily protein. | DinB superfamily protein. | 0.543 |
SHN11348.1 | ytxJ | SAMN05444387_4186 | SAMN05444387_0759 | DinB superfamily protein. | Bacillithiol system protein YtxJ. | 0.409 |
SHN20715.1 | SHL92668.1 | SAMN05444387_4683 | SAMN05444387_1460 | DinB superfamily protein. | Putative bacilliredoxin, YphP/YqiW family; Belongs to the UPF0403 family. | 0.573 |
SHN20715.1 | SHN11348.1 | SAMN05444387_4683 | SAMN05444387_4186 | DinB superfamily protein. | DinB superfamily protein. | 0.543 |
SHN20715.1 | SHN21541.1 | SAMN05444387_4683 | SAMN05444387_4722 | DinB superfamily protein. | Protein of unknown function. | 0.453 |
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