Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHL30088.1 | SHL93890.1 | SAMN05444387_0266 | SAMN05444387_1492 | Hypothetical protein. | Ferrous iron transport protein A. | 0.499 |
SHL30088.1 | SHM07899.1 | SAMN05444387_0266 | SAMN05444387_1863 | Hypothetical protein. | Hypothetical protein. | 0.760 |
SHL30088.1 | SHM34417.1 | SAMN05444387_0266 | SAMN05444387_2255 | Hypothetical protein. | Hypothetical protein. | 0.753 |
SHL30088.1 | SHM44980.1 | SAMN05444387_0266 | SAMN05444387_2520 | Hypothetical protein. | Hypothetical protein. | 0.602 |
SHL30088.1 | SHM75656.1 | SAMN05444387_0266 | SAMN05444387_3110 | Hypothetical protein. | Protein of unknown function. | 0.763 |
SHL93857.1 | SHL93890.1 | SAMN05444387_1491 | SAMN05444387_1492 | Protein SCO1/2. | Ferrous iron transport protein A. | 0.652 |
SHL93857.1 | SHL93970.1 | SAMN05444387_1491 | SAMN05444387_1494 | Protein SCO1/2. | Virus attachment protein p12 family protein; Manually curated. | 0.522 |
SHL93857.1 | feoB | SAMN05444387_1491 | SAMN05444387_1493 | Protein SCO1/2. | Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | 0.571 |
SHL93890.1 | SHL30088.1 | SAMN05444387_1492 | SAMN05444387_0266 | Ferrous iron transport protein A. | Hypothetical protein. | 0.499 |
SHL93890.1 | SHL93857.1 | SAMN05444387_1492 | SAMN05444387_1491 | Ferrous iron transport protein A. | Protein SCO1/2. | 0.652 |
SHL93890.1 | SHL93970.1 | SAMN05444387_1492 | SAMN05444387_1494 | Ferrous iron transport protein A. | Virus attachment protein p12 family protein; Manually curated. | 0.800 |
SHL93890.1 | SHL94010.1 | SAMN05444387_1492 | SAMN05444387_1495 | Ferrous iron transport protein A. | Hypothetical protein. | 0.486 |
SHL93890.1 | SHM07899.1 | SAMN05444387_1492 | SAMN05444387_1863 | Ferrous iron transport protein A. | Hypothetical protein. | 0.513 |
SHL93890.1 | SHM34417.1 | SAMN05444387_1492 | SAMN05444387_2255 | Ferrous iron transport protein A. | Hypothetical protein. | 0.497 |
SHL93890.1 | SHM44980.1 | SAMN05444387_1492 | SAMN05444387_2520 | Ferrous iron transport protein A. | Hypothetical protein. | 0.554 |
SHL93890.1 | SHM68261.1 | SAMN05444387_1492 | SAMN05444387_2906 | Ferrous iron transport protein A. | SprT-like family protein. | 0.486 |
SHL93890.1 | SHM75656.1 | SAMN05444387_1492 | SAMN05444387_3110 | Ferrous iron transport protein A. | Protein of unknown function. | 0.560 |
SHL93890.1 | feoB | SAMN05444387_1492 | SAMN05444387_1493 | Ferrous iron transport protein A. | Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | 0.985 |
SHL93970.1 | SHL93857.1 | SAMN05444387_1494 | SAMN05444387_1491 | Virus attachment protein p12 family protein; Manually curated. | Protein SCO1/2. | 0.522 |
SHL93970.1 | SHL93890.1 | SAMN05444387_1494 | SAMN05444387_1492 | Virus attachment protein p12 family protein; Manually curated. | Ferrous iron transport protein A. | 0.800 |
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