STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL96551.1Glycosyltransferase involved in cell wall bisynthesis. (361 aa)    
Predicted Functional Partners:
SHL96514.1
Membrane protein involved in the export of O-antigen and teichoic acid.
  
    0.824
SHL96583.1
Hypothetical protein.
       0.773
SHL96480.1
Hypothetical protein.
       0.686
SHL96444.1
Hypothetical protein.
       0.681
SHM74792.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
 
 0.644
SHM52892.1
Undecaprenyl-phosphate galactose phosphotransferase/putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase.
 
 
 0.593
bshB1
Bacillithiol biosynthesis deacetylase BshB1.
   
 
  0.582
SHN14614.1
Amino acid adenylation domain-containing protein.
   
 
 0.563
SHM72715.1
UDP-N-acetylglucosamine 4-epimerase.
  
 
  0.554
SHM11489.1
Por secretion system C-terminal sorting domain-containing protein.
   
  0.546
Your Current Organism:
Flavobacterium pectinovorum
NCBI taxonomy Id: 29533
Other names: ATCC 19366, CIP 104742, Cytophaga pectinovora, DSM 6368, Empedobacter pectinovorum, F. pectinovorum, Flavibacterium pectinovorum, IFO 15945, JCM 8518, LMG 4031, LMG:4031, NBRC 15945, NCIMB 9059, strain number 81 Dorey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.