Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
araAL-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. (502 aa)    
Predicted Functional Partners:
SHL99933.1
L-ribulokinase.
 
 
 0.999
SHL99965.1
L-ribulose 5-phosphate 4-epimerase.
 
  
 0.963
SHM00053.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 
 0.957
SHL99760.1
alpha-N-arabinofuranosidase.
 
 
 0.931
SHL23472.1
Beta-galactosidase.
  
 
  0.925
SHL99546.1
Aldose 1-epimerase.
  
 
 0.916
SHL23599.1
Alpha-galactosidase.
  
  
  0.911
SHL24016.1
Alpha galactosidase A.
    
  0.911
SHL20593.1
Beta-galactosidase.
   
 
  0.901
SHM65933.1
Beta-galactosidase.
   
 
  0.901
Your Current Organism:
Flavobacterium pectinovorum
NCBI taxonomy Id: 29533
Other names: ATCC 19366, CIP 104742, Cytophaga pectinovora, DSM 6368, Empedobacter pectinovorum, F. pectinovorum, Flavibacterium pectinovorum, IFO 15945, JCM 8518, LMG 4031, LMG:4031, NBRC 15945, NCIMB 9059, strain number 81 Dorey
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