STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM10661.1Uncharacterized membrane protein. (196 aa)    
Predicted Functional Partners:
SHM01063.1
Surface antigen.
  
     0.656
SHM01330.1
Phosphoserine phosphatase.
  
     0.642
SHM10616.1
4-hydroxybenzoate polyprenyltransferase.
       0.603
SHM10703.1
Mevalonate kinase.
       0.563
SHM10745.1
Plasmid stabilization system protein ParE.
       0.563
SHM10795.1
Hypothetical protein.
       0.563
SHL53771.1
Hypothetical protein.
  
     0.515
SHN18198.1
Hypothetical protein.
  
     0.509
SHM10833.1
Diphosphomevalonate decarboxylase.
       0.499
SHL28588.1
Hypothetical protein.
  
     0.485
Your Current Organism:
Flavobacterium pectinovorum
NCBI taxonomy Id: 29533
Other names: ATCC 19366, CIP 104742, Cytophaga pectinovora, DSM 6368, Empedobacter pectinovorum, F. pectinovorum, Flavibacterium pectinovorum, IFO 15945, JCM 8518, LMG 4031, LMG:4031, NBRC 15945, NCIMB 9059, strain number 81 Dorey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.