Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHL24547.1 | SHL97218.1 | SAMN05444387_0123 | SAMN05444387_1587 | Outer membrane lipoprotein-sorting protein. | Protein involved in gliding motility SprE. | 0.722 |
SHL24547.1 | SHM05283.1 | SAMN05444387_0123 | SAMN05444387_1798 | Outer membrane lipoprotein-sorting protein. | Aspartyl protease. | 0.645 |
SHL24547.1 | SHM20525.1 | SAMN05444387_0123 | SAMN05444387_2189 | Outer membrane lipoprotein-sorting protein. | Sporulation related domain-containing protein. | 0.657 |
SHL24547.1 | SHM36330.1 | SAMN05444387_0123 | SAMN05444387_2308 | Outer membrane lipoprotein-sorting protein. | Family of unknown function. | 0.750 |
SHL24547.1 | SHM50813.1 | SAMN05444387_0123 | SAMN05444387_2674 | Outer membrane lipoprotein-sorting protein. | Outer membrane protein transport protein (OMPP1/FadL/TodX). | 0.725 |
SHL24547.1 | SHM75541.1 | SAMN05444387_0123 | SAMN05444387_3105 | Outer membrane lipoprotein-sorting protein. | Hypothetical protein. | 0.656 |
SHL24547.1 | SHM83494.1 | SAMN05444387_0123 | SAMN05444387_3351 | Outer membrane lipoprotein-sorting protein. | Hypothetical protein. | 0.655 |
SHL24547.1 | SHM96642.1 | SAMN05444387_0123 | SAMN05444387_3611 | Outer membrane lipoprotein-sorting protein. | Hypothetical protein. | 0.654 |
SHL24547.1 | SHN10394.1 | SAMN05444387_0123 | SAMN05444387_4114 | Outer membrane lipoprotein-sorting protein. | Protein of unknown function. | 0.623 |
SHL24547.1 | lptC | SAMN05444387_0123 | SAMN05444387_1961 | Outer membrane lipoprotein-sorting protein. | LPS export ABC transporter protein LptC. | 0.650 |
SHL97218.1 | SHL24547.1 | SAMN05444387_1587 | SAMN05444387_0123 | Protein involved in gliding motility SprE. | Outer membrane lipoprotein-sorting protein. | 0.722 |
SHL97218.1 | SHM05283.1 | SAMN05444387_1587 | SAMN05444387_1798 | Protein involved in gliding motility SprE. | Aspartyl protease. | 0.671 |
SHL97218.1 | SHM20525.1 | SAMN05444387_1587 | SAMN05444387_2189 | Protein involved in gliding motility SprE. | Sporulation related domain-containing protein. | 0.618 |
SHL97218.1 | SHM36330.1 | SAMN05444387_1587 | SAMN05444387_2308 | Protein involved in gliding motility SprE. | Family of unknown function. | 0.764 |
SHL97218.1 | SHM50813.1 | SAMN05444387_1587 | SAMN05444387_2674 | Protein involved in gliding motility SprE. | Outer membrane protein transport protein (OMPP1/FadL/TodX). | 0.745 |
SHL97218.1 | SHM75541.1 | SAMN05444387_1587 | SAMN05444387_3105 | Protein involved in gliding motility SprE. | Hypothetical protein. | 0.734 |
SHL97218.1 | SHM83494.1 | SAMN05444387_1587 | SAMN05444387_3351 | Protein involved in gliding motility SprE. | Hypothetical protein. | 0.715 |
SHL97218.1 | SHM96642.1 | SAMN05444387_1587 | SAMN05444387_3611 | Protein involved in gliding motility SprE. | Hypothetical protein. | 0.524 |
SHL97218.1 | SHN10394.1 | SAMN05444387_1587 | SAMN05444387_4114 | Protein involved in gliding motility SprE. | Protein of unknown function. | 0.718 |
SHM05283.1 | SHL24547.1 | SAMN05444387_1798 | SAMN05444387_0123 | Aspartyl protease. | Outer membrane lipoprotein-sorting protein. | 0.645 |
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