Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHL66044.1 | SHM34299.1 | SAMN05444387_1169 | SAMN05444387_2252 | Uncharacterized conserved protein YkwD, contains CAP (CSP/antigen 5/PR1) domain. | Uncharacterized conserved protein YkwD, contains CAP (CSP/antigen 5/PR1) domain. | 0.469 |
SHL66044.1 | SHM92462.1 | SAMN05444387_1169 | SAMN05444387_3457 | Uncharacterized conserved protein YkwD, contains CAP (CSP/antigen 5/PR1) domain. | Allosteric NADP-dependent malic enzyme. | 0.676 |
SHM34299.1 | SHL66044.1 | SAMN05444387_2252 | SAMN05444387_1169 | Uncharacterized conserved protein YkwD, contains CAP (CSP/antigen 5/PR1) domain. | Uncharacterized conserved protein YkwD, contains CAP (CSP/antigen 5/PR1) domain. | 0.469 |
SHM34299.1 | SHM92462.1 | SAMN05444387_2252 | SAMN05444387_3457 | Uncharacterized conserved protein YkwD, contains CAP (CSP/antigen 5/PR1) domain. | Allosteric NADP-dependent malic enzyme. | 0.676 |
SHM34299.1 | pdxH | SAMN05444387_2252 | SAMN05444387_2253 | Uncharacterized conserved protein YkwD, contains CAP (CSP/antigen 5/PR1) domain. | Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). | 0.484 |
SHM92462.1 | SHL66044.1 | SAMN05444387_3457 | SAMN05444387_1169 | Allosteric NADP-dependent malic enzyme. | Uncharacterized conserved protein YkwD, contains CAP (CSP/antigen 5/PR1) domain. | 0.676 |
SHM92462.1 | SHM34299.1 | SAMN05444387_3457 | SAMN05444387_2252 | Allosteric NADP-dependent malic enzyme. | Uncharacterized conserved protein YkwD, contains CAP (CSP/antigen 5/PR1) domain. | 0.676 |
pdxH | SHM34299.1 | SAMN05444387_2253 | SAMN05444387_2252 | Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). | Uncharacterized conserved protein YkwD, contains CAP (CSP/antigen 5/PR1) domain. | 0.484 |