Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHL36191.1 | SHM45159.1 | SAMN05444387_0409 | SAMN05444387_2524 | CarboxypepD_reg-like domain-containing protein. | Hypothetical protein. | 0.580 |
SHL36191.1 | SHM45307.1 | SAMN05444387_0409 | SAMN05444387_2528 | CarboxypepD_reg-like domain-containing protein. | Hypothetical protein. | 0.447 |
SHL36191.1 | SHM92774.1 | SAMN05444387_0409 | SAMN05444387_3467 | CarboxypepD_reg-like domain-containing protein. | Cytochrome C oxidase subunit IV. | 0.668 |
SHL58676.1 | SHM43157.1 | SAMN05444387_0999 | SAMN05444387_2476 | Signal transduction histidine kinase. | PAS domain S-box-containing protein. | 0.999 |
SHL58676.1 | SHM45307.1 | SAMN05444387_0999 | SAMN05444387_2528 | Signal transduction histidine kinase. | Hypothetical protein. | 0.446 |
SHL58676.1 | SHM52486.1 | SAMN05444387_0999 | SAMN05444387_2721 | Signal transduction histidine kinase. | Hpt domain-containing protein. | 0.996 |
SHM43157.1 | SHL58676.1 | SAMN05444387_2476 | SAMN05444387_0999 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.999 |
SHM43157.1 | SHM45307.1 | SAMN05444387_2476 | SAMN05444387_2528 | PAS domain S-box-containing protein. | Hypothetical protein. | 0.489 |
SHM43157.1 | SHM52486.1 | SAMN05444387_2476 | SAMN05444387_2721 | PAS domain S-box-containing protein. | Hpt domain-containing protein. | 0.989 |
SHM45159.1 | SHL36191.1 | SAMN05444387_2524 | SAMN05444387_0409 | Hypothetical protein. | CarboxypepD_reg-like domain-containing protein. | 0.580 |
SHM45159.1 | SHM45194.1 | SAMN05444387_2524 | SAMN05444387_2525 | Hypothetical protein. | Hypothetical protein. | 0.778 |
SHM45159.1 | SHM45307.1 | SAMN05444387_2524 | SAMN05444387_2528 | Hypothetical protein. | Hypothetical protein. | 0.474 |
SHM45159.1 | SHM52486.1 | SAMN05444387_2524 | SAMN05444387_2721 | Hypothetical protein. | Hpt domain-containing protein. | 0.537 |
SHM45194.1 | SHM45159.1 | SAMN05444387_2525 | SAMN05444387_2524 | Hypothetical protein. | Hypothetical protein. | 0.778 |
SHM45194.1 | SHM45234.1 | SAMN05444387_2525 | SAMN05444387_2526 | Hypothetical protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.581 |
SHM45194.1 | SHM45270.1 | SAMN05444387_2525 | SAMN05444387_2527 | Hypothetical protein. | Hypothetical protein. | 0.503 |
SHM45194.1 | SHM45307.1 | SAMN05444387_2525 | SAMN05444387_2528 | Hypothetical protein. | Hypothetical protein. | 0.487 |
SHM45234.1 | SHM45194.1 | SAMN05444387_2526 | SAMN05444387_2525 | RNA polymerase sigma-70 factor, ECF subfamily. | Hypothetical protein. | 0.581 |
SHM45234.1 | SHM45270.1 | SAMN05444387_2526 | SAMN05444387_2527 | RNA polymerase sigma-70 factor, ECF subfamily. | Hypothetical protein. | 0.749 |
SHM45234.1 | SHM45307.1 | SAMN05444387_2526 | SAMN05444387_2528 | RNA polymerase sigma-70 factor, ECF subfamily. | Hypothetical protein. | 0.772 |
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