Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SHM00623.1 | SHM49943.1 | SAMN05444387_1680 | SAMN05444387_2650 | Predicted dehydrogenase. | HPP family protein. | 0.537 |
| SHM12505.1 | SHM49943.1 | SAMN05444387_1981 | SAMN05444387_2650 | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | HPP family protein. | 0.544 |
| SHM12505.1 | apt | SAMN05444387_1981 | SAMN05444387_1206 | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.447 |
| SHM12505.1 | guaA | SAMN05444387_1981 | SAMN05444387_0382 | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.620 |
| SHM49906.1 | SHM49943.1 | SAMN05444387_2649 | SAMN05444387_2650 | Chloride channel protein, CIC family. | HPP family protein. | 0.532 |
| SHM49943.1 | SHM00623.1 | SAMN05444387_2650 | SAMN05444387_1680 | HPP family protein. | Predicted dehydrogenase. | 0.537 |
| SHM49943.1 | SHM12505.1 | SAMN05444387_2650 | SAMN05444387_1981 | HPP family protein. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.544 |
| SHM49943.1 | SHM49906.1 | SAMN05444387_2650 | SAMN05444387_2649 | HPP family protein. | Chloride channel protein, CIC family. | 0.532 |
| SHM49943.1 | SHM49986.1 | SAMN05444387_2650 | SAMN05444387_2651 | HPP family protein. | pRiA4b ORF-3-like protein. | 0.453 |
| SHM49943.1 | apt | SAMN05444387_2650 | SAMN05444387_1206 | HPP family protein. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.557 |
| SHM49943.1 | guaA | SAMN05444387_2650 | SAMN05444387_0382 | HPP family protein. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.954 |
| SHM49943.1 | purH | SAMN05444387_2650 | SAMN05444387_2005 | HPP family protein. | Phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase. | 0.530 |
| SHM49943.1 | purL | SAMN05444387_2650 | SAMN05444387_2484 | HPP family protein. | Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | 0.453 |
| SHM49986.1 | SHM49943.1 | SAMN05444387_2651 | SAMN05444387_2650 | pRiA4b ORF-3-like protein. | HPP family protein. | 0.453 |
| apt | SHM12505.1 | SAMN05444387_1206 | SAMN05444387_1981 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.447 |
| apt | SHM49943.1 | SAMN05444387_1206 | SAMN05444387_2650 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | HPP family protein. | 0.557 |
| apt | guaA | SAMN05444387_1206 | SAMN05444387_0382 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.995 |
| apt | purH | SAMN05444387_1206 | SAMN05444387_2005 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase. | 0.963 |
| apt | purL | SAMN05444387_1206 | SAMN05444387_2484 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | 0.853 |
| guaA | SHM12505.1 | SAMN05444387_0382 | SAMN05444387_1981 | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.620 |
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