Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHL58676.1 | SHM50430.1 | SAMN05444387_0999 | SAMN05444387_2662 | Signal transduction histidine kinase. | ABC-2 type transport system ATP-binding protein. | 0.561 |
SHL58676.1 | SHN14134.1 | SAMN05444387_0999 | SAMN05444387_4272 | Signal transduction histidine kinase. | Monosaccharide ABC transporter substrate-binding protein, CUT2 family. | 0.999 |
SHL98799.1 | SHM50430.1 | SAMN05444387_1629 | SAMN05444387_2662 | ABC-2 type transport system permease protein. | ABC-2 type transport system ATP-binding protein. | 0.716 |
SHM46528.1 | SHM50430.1 | SAMN05444387_2561 | SAMN05444387_2662 | ABC-2 type transport system permease protein. | ABC-2 type transport system ATP-binding protein. | 0.666 |
SHM50390.1 | SHM50430.1 | SAMN05444387_2661 | SAMN05444387_2662 | Hypothetical protein. | ABC-2 type transport system ATP-binding protein. | 0.647 |
SHM50390.1 | SHM50473.1 | SAMN05444387_2661 | SAMN05444387_2663 | Hypothetical protein. | ABC-2 family transporter protein. | 0.659 |
SHM50390.1 | SHM50508.1 | SAMN05444387_2661 | SAMN05444387_2664 | Hypothetical protein. | Gliding motility-associated C-terminal domain-containing protein. | 0.522 |
SHM50430.1 | SHL58676.1 | SAMN05444387_2662 | SAMN05444387_0999 | ABC-2 type transport system ATP-binding protein. | Signal transduction histidine kinase. | 0.561 |
SHM50430.1 | SHL98799.1 | SAMN05444387_2662 | SAMN05444387_1629 | ABC-2 type transport system ATP-binding protein. | ABC-2 type transport system permease protein. | 0.716 |
SHM50430.1 | SHM46528.1 | SAMN05444387_2662 | SAMN05444387_2561 | ABC-2 type transport system ATP-binding protein. | ABC-2 type transport system permease protein. | 0.666 |
SHM50430.1 | SHM50390.1 | SAMN05444387_2662 | SAMN05444387_2661 | ABC-2 type transport system ATP-binding protein. | Hypothetical protein. | 0.647 |
SHM50430.1 | SHM50473.1 | SAMN05444387_2662 | SAMN05444387_2663 | ABC-2 type transport system ATP-binding protein. | ABC-2 family transporter protein. | 0.982 |
SHM50430.1 | SHM50508.1 | SAMN05444387_2662 | SAMN05444387_2664 | ABC-2 type transport system ATP-binding protein. | Gliding motility-associated C-terminal domain-containing protein. | 0.780 |
SHM50430.1 | SHN14134.1 | SAMN05444387_2662 | SAMN05444387_4272 | ABC-2 type transport system ATP-binding protein. | Monosaccharide ABC transporter substrate-binding protein, CUT2 family. | 0.529 |
SHM50430.1 | SHN18335.1 | SAMN05444387_2662 | SAMN05444387_4513 | ABC-2 type transport system ATP-binding protein. | ABC-2 type transport system permease protein. | 0.696 |
SHM50430.1 | gldF | SAMN05444387_2662 | SAMN05444387_4706 | ABC-2 type transport system ATP-binding protein. | Protein involved in gliding motility GldF. | 0.745 |
SHM50430.1 | gldG | SAMN05444387_2662 | SAMN05444387_4707 | ABC-2 type transport system ATP-binding protein. | Protein involved in gliding motility GldG. | 0.745 |
SHM50473.1 | SHM50390.1 | SAMN05444387_2663 | SAMN05444387_2661 | ABC-2 family transporter protein. | Hypothetical protein. | 0.659 |
SHM50473.1 | SHM50430.1 | SAMN05444387_2663 | SAMN05444387_2662 | ABC-2 family transporter protein. | ABC-2 type transport system ATP-binding protein. | 0.982 |
SHM50473.1 | SHM50508.1 | SAMN05444387_2663 | SAMN05444387_2664 | ABC-2 family transporter protein. | Gliding motility-associated C-terminal domain-containing protein. | 0.800 |
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