Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHL49698.1 | SHM55584.1 | SAMN05444387_0746 | SAMN05444387_2804 | Argininosuccinate synthase. | Putative acetyltransferase. | 0.602 |
SHL49698.1 | SHM70350.1 | SAMN05444387_0746 | SAMN05444387_2959 | Argininosuccinate synthase. | Acetyltransferase (GNAT) family protein. | 0.602 |
SHL49698.1 | SHN10903.1 | SAMN05444387_0746 | SAMN05444387_4152 | Argininosuccinate synthase. | Aspartate/methionine/tyrosine aminotransferase. | 0.448 |
SHL49698.1 | argB | SAMN05444387_0746 | SAMN05444387_0753 | Argininosuccinate synthase. | N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.979 |
SHL49698.1 | argC | SAMN05444387_0746 | SAMN05444387_0747 | Argininosuccinate synthase. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.994 |
SHL49698.1 | hisI | SAMN05444387_0746 | SAMN05444387_1286 | Argininosuccinate synthase. | phosphoribosyl-ATP pyrophosphatase; In the N-terminal section; belongs to the PRA-CH family. | 0.728 |
SHM55496.1 | SHM55584.1 | SAMN05444387_2802 | SAMN05444387_2804 | Hypothetical protein. | Putative acetyltransferase. | 0.517 |
SHM55496.1 | prmC | SAMN05444387_2802 | SAMN05444387_2803 | Hypothetical protein. | Release factor glutamine methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. | 0.714 |
SHM55584.1 | SHL49698.1 | SAMN05444387_2804 | SAMN05444387_0746 | Putative acetyltransferase. | Argininosuccinate synthase. | 0.602 |
SHM55584.1 | SHM55496.1 | SAMN05444387_2804 | SAMN05444387_2802 | Putative acetyltransferase. | Hypothetical protein. | 0.517 |
SHM55584.1 | SHM55665.1 | SAMN05444387_2804 | SAMN05444387_2806 | Putative acetyltransferase. | Putative hydrolase of the HAD superfamily. | 0.611 |
SHM55584.1 | SHM70350.1 | SAMN05444387_2804 | SAMN05444387_2959 | Putative acetyltransferase. | Acetyltransferase (GNAT) family protein. | 0.573 |
SHM55584.1 | SHN10903.1 | SAMN05444387_2804 | SAMN05444387_4152 | Putative acetyltransferase. | Aspartate/methionine/tyrosine aminotransferase. | 0.516 |
SHM55584.1 | argB | SAMN05444387_2804 | SAMN05444387_0753 | Putative acetyltransferase. | N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.534 |
SHM55584.1 | argC | SAMN05444387_2804 | SAMN05444387_0747 | Putative acetyltransferase. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.532 |
SHM55584.1 | hisI | SAMN05444387_2804 | SAMN05444387_1286 | Putative acetyltransferase. | phosphoribosyl-ATP pyrophosphatase; In the N-terminal section; belongs to the PRA-CH family. | 0.541 |
SHM55584.1 | prmC | SAMN05444387_2804 | SAMN05444387_2803 | Putative acetyltransferase. | Release factor glutamine methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. | 0.675 |
SHM55584.1 | ribD | SAMN05444387_2804 | SAMN05444387_2805 | Putative acetyltransferase. | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.659 |
SHM55665.1 | SHM55584.1 | SAMN05444387_2806 | SAMN05444387_2804 | Putative hydrolase of the HAD superfamily. | Putative acetyltransferase. | 0.611 |
SHM55665.1 | prmC | SAMN05444387_2806 | SAMN05444387_2803 | Putative hydrolase of the HAD superfamily. | Release factor glutamine methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. | 0.486 |
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