Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHM79930.1 | SHM79966.1 | SAMN05444387_3221 | SAMN05444387_3222 | Protein of unknown function. | Conjugative transposon protein TraO. | 0.950 |
SHM79930.1 | SHM80451.1 | SAMN05444387_3221 | SAMN05444387_3237 | Protein of unknown function. | Relaxase/Mobilisation nuclease domain-containing protein. | 0.774 |
SHM79930.1 | SHM80581.1 | SAMN05444387_3221 | SAMN05444387_3241 | Protein of unknown function. | Helicase conserved C-terminal domain-containing protein; Manually curated. | 0.773 |
SHM79930.1 | SHM80678.1 | SAMN05444387_3221 | SAMN05444387_3244 | Protein of unknown function. | ORF6N domain-containing protein. | 0.614 |
SHM79930.1 | SHM80711.1 | SAMN05444387_3221 | SAMN05444387_3245 | Protein of unknown function. | DNA topoisomerase-3. | 0.727 |
SHM79930.1 | SHM80740.1 | SAMN05444387_3221 | SAMN05444387_3246 | Protein of unknown function. | Protein of unknown function. | 0.774 |
SHM79930.1 | SHM80767.1 | SAMN05444387_3221 | SAMN05444387_3247 | Protein of unknown function. | Helix-turn-helix domain-containing protein. | 0.771 |
SHM79966.1 | SHM79930.1 | SAMN05444387_3222 | SAMN05444387_3221 | Conjugative transposon protein TraO. | Protein of unknown function. | 0.950 |
SHM79966.1 | SHM80451.1 | SAMN05444387_3222 | SAMN05444387_3237 | Conjugative transposon protein TraO. | Relaxase/Mobilisation nuclease domain-containing protein. | 0.775 |
SHM79966.1 | SHM80581.1 | SAMN05444387_3222 | SAMN05444387_3241 | Conjugative transposon protein TraO. | Helicase conserved C-terminal domain-containing protein; Manually curated. | 0.773 |
SHM79966.1 | SHM80678.1 | SAMN05444387_3222 | SAMN05444387_3244 | Conjugative transposon protein TraO. | ORF6N domain-containing protein. | 0.625 |
SHM79966.1 | SHM80711.1 | SAMN05444387_3222 | SAMN05444387_3245 | Conjugative transposon protein TraO. | DNA topoisomerase-3. | 0.724 |
SHM79966.1 | SHM80740.1 | SAMN05444387_3222 | SAMN05444387_3246 | Conjugative transposon protein TraO. | Protein of unknown function. | 0.774 |
SHM79966.1 | SHM80767.1 | SAMN05444387_3222 | SAMN05444387_3247 | Conjugative transposon protein TraO. | Helix-turn-helix domain-containing protein. | 0.772 |
SHM80451.1 | SHM79930.1 | SAMN05444387_3237 | SAMN05444387_3221 | Relaxase/Mobilisation nuclease domain-containing protein. | Protein of unknown function. | 0.774 |
SHM80451.1 | SHM79966.1 | SAMN05444387_3237 | SAMN05444387_3222 | Relaxase/Mobilisation nuclease domain-containing protein. | Conjugative transposon protein TraO. | 0.775 |
SHM80451.1 | SHM80581.1 | SAMN05444387_3237 | SAMN05444387_3241 | Relaxase/Mobilisation nuclease domain-containing protein. | Helicase conserved C-terminal domain-containing protein; Manually curated. | 0.846 |
SHM80451.1 | SHM80678.1 | SAMN05444387_3237 | SAMN05444387_3244 | Relaxase/Mobilisation nuclease domain-containing protein. | ORF6N domain-containing protein. | 0.482 |
SHM80451.1 | SHM80711.1 | SAMN05444387_3237 | SAMN05444387_3245 | Relaxase/Mobilisation nuclease domain-containing protein. | DNA topoisomerase-3. | 0.752 |
SHM80451.1 | SHM80740.1 | SAMN05444387_3237 | SAMN05444387_3246 | Relaxase/Mobilisation nuclease domain-containing protein. | Protein of unknown function. | 0.773 |
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