node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHM83779.1 | SHM83824.1 | SAMN05444387_3362 | SAMN05444387_3364 | LSU ribosomal protein L31P; Belongs to the bacterial ribosomal protein bL31 family. | ATP-binding cassette, subfamily F, member 3. | 0.828 |
SHM83779.1 | rplC | SAMN05444387_3362 | SAMN05444387_2976 | LSU ribosomal protein L31P; Belongs to the bacterial ribosomal protein bL31 family. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.998 |
SHM83779.1 | rplM | SAMN05444387_3362 | SAMN05444387_2166 | LSU ribosomal protein L31P; Belongs to the bacterial ribosomal protein bL31 family. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.999 |
SHM83779.1 | rplR | SAMN05444387_3362 | SAMN05444387_2992 | LSU ribosomal protein L31P; Belongs to the bacterial ribosomal protein bL31 family. | LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.996 |
SHM83779.1 | rplT | SAMN05444387_3362 | SAMN05444387_3448 | LSU ribosomal protein L31P; Belongs to the bacterial ribosomal protein bL31 family. | LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.999 |
SHM83779.1 | rplU | SAMN05444387_3362 | SAMN05444387_2100 | LSU ribosomal protein L31P; Belongs to the bacterial ribosomal protein bL31 family. | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.999 |
SHM83779.1 | rplW | SAMN05444387_3362 | SAMN05444387_2978 | LSU ribosomal protein L31P; Belongs to the bacterial ribosomal protein bL31 family. | LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.997 |
SHM83779.1 | rpmH | SAMN05444387_3362 | SAMN05444387_3368 | LSU ribosomal protein L31P; Belongs to the bacterial ribosomal protein bL31 family. | LSU ribosomal protein L34P; Belongs to the bacterial ribosomal protein bL34 family. | 0.998 |
SHM83779.1 | rpsC | SAMN05444387_3362 | SAMN05444387_2982 | LSU ribosomal protein L31P; Belongs to the bacterial ribosomal protein bL31 family. | SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.997 |
SHM83779.1 | rpsO | SAMN05444387_3362 | SAMN05444387_1991 | LSU ribosomal protein L31P; Belongs to the bacterial ribosomal protein bL31 family. | SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.999 |
SHM83824.1 | SHM83779.1 | SAMN05444387_3364 | SAMN05444387_3362 | ATP-binding cassette, subfamily F, member 3. | LSU ribosomal protein L31P; Belongs to the bacterial ribosomal protein bL31 family. | 0.828 |
SHM83824.1 | rplC | SAMN05444387_3364 | SAMN05444387_2976 | ATP-binding cassette, subfamily F, member 3. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.786 |
SHM83824.1 | rplM | SAMN05444387_3364 | SAMN05444387_2166 | ATP-binding cassette, subfamily F, member 3. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.790 |
SHM83824.1 | rplR | SAMN05444387_3364 | SAMN05444387_2992 | ATP-binding cassette, subfamily F, member 3. | LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.785 |
SHM83824.1 | rplT | SAMN05444387_3364 | SAMN05444387_3448 | ATP-binding cassette, subfamily F, member 3. | LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.787 |
SHM83824.1 | rplU | SAMN05444387_3364 | SAMN05444387_2100 | ATP-binding cassette, subfamily F, member 3. | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.795 |
SHM83824.1 | rplW | SAMN05444387_3364 | SAMN05444387_2978 | ATP-binding cassette, subfamily F, member 3. | LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.784 |
SHM83824.1 | rpmH | SAMN05444387_3364 | SAMN05444387_3368 | ATP-binding cassette, subfamily F, member 3. | LSU ribosomal protein L34P; Belongs to the bacterial ribosomal protein bL34 family. | 0.785 |
SHM83824.1 | rpsC | SAMN05444387_3364 | SAMN05444387_2982 | ATP-binding cassette, subfamily F, member 3. | SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.791 |
SHM83824.1 | rpsO | SAMN05444387_3364 | SAMN05444387_1991 | ATP-binding cassette, subfamily F, member 3. | SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.791 |