STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN06902.1MoxR-like ATPase. (334 aa)    
Predicted Functional Partners:
SHN06882.1
Protein of unknown function DUF58.
  
 0.939
SHN06846.1
Ca-activated chloride channel family protein.
 
 
 0.905
SHN06830.1
Ca-activated chloride channel family protein.
 
 
 0.889
SHM09140.1
Protein of unknown function DUF58.
 
  
 0.604
SHN06797.1
Oxygen tolerance.
 
   
 0.602
SHN06863.1
Hypothetical protein.
 
    0.593
SHN06921.1
Predicted oxidoreductase.
       0.525
SHN06814.1
Tetratricopeptide repeat-containing protein.
 
     0.511
SHM92462.1
Allosteric NADP-dependent malic enzyme.
  
    0.476
SHN06938.1
Protein N-acetyltransferase, RimJ/RimL family.
       0.446
Your Current Organism:
Flavobacterium pectinovorum
NCBI taxonomy Id: 29533
Other names: ATCC 19366, CIP 104742, Cytophaga pectinovora, DSM 6368, Empedobacter pectinovorum, F. pectinovorum, Flavibacterium pectinovorum, IFO 15945, JCM 8518, LMG 4031, LMG:4031, NBRC 15945, NCIMB 9059, strain number 81 Dorey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.