Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHL48135.1 | SHL71754.1 | SAMN05444387_0707 | SAMN05444387_1321 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | Uridine phosphorylase. | 0.908 |
SHL48135.1 | SHN10736.1 | SAMN05444387_0707 | SAMN05444387_4139 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | dCMP deaminase. | 0.909 |
SHL48135.1 | cdd | SAMN05444387_0707 | SAMN05444387_2109 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.911 |
SHL48135.1 | surE | SAMN05444387_0707 | SAMN05444387_1978 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | 5'-nucleotidase /3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.916 |
SHL48135.1 | tadA | SAMN05444387_0707 | SAMN05444387_2082 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | tRNA(adenine34) deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | 0.452 |
SHL48135.1 | tdk | SAMN05444387_0707 | SAMN05444387_4084 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | Thymidine kinase. | 0.925 |
SHL48135.1 | thyA | SAMN05444387_0707 | SAMN05444387_2019 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis. | 0.911 |
SHL71754.1 | SHL48135.1 | SAMN05444387_1321 | SAMN05444387_0707 | Uridine phosphorylase. | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | 0.908 |
SHL71754.1 | SHN10736.1 | SAMN05444387_1321 | SAMN05444387_4139 | Uridine phosphorylase. | dCMP deaminase. | 0.646 |
SHL71754.1 | cdd | SAMN05444387_1321 | SAMN05444387_2109 | Uridine phosphorylase. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.988 |
SHL71754.1 | surE | SAMN05444387_1321 | SAMN05444387_1978 | Uridine phosphorylase. | 5'-nucleotidase /3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.911 |
SHL71754.1 | tdk | SAMN05444387_1321 | SAMN05444387_4084 | Uridine phosphorylase. | Thymidine kinase. | 0.933 |
SHM14228.1 | SHN10736.1 | SAMN05444387_2031 | SAMN05444387_4139 | Deoxyadenosine/deoxycytidine kinase. | dCMP deaminase. | 0.924 |
SHM14228.1 | cdd | SAMN05444387_2031 | SAMN05444387_2109 | Deoxyadenosine/deoxycytidine kinase. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.918 |
SHM14228.1 | dut | SAMN05444387_2031 | SAMN05444387_1599 | Deoxyadenosine/deoxycytidine kinase. | dUTP pyrophosphatase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | 0.442 |
SHM14228.1 | surE | SAMN05444387_2031 | SAMN05444387_1978 | Deoxyadenosine/deoxycytidine kinase. | 5'-nucleotidase /3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.908 |
SHM14228.1 | tadA | SAMN05444387_2031 | SAMN05444387_2082 | Deoxyadenosine/deoxycytidine kinase. | tRNA(adenine34) deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | 0.893 |
SHM14228.1 | tdk | SAMN05444387_2031 | SAMN05444387_4084 | Deoxyadenosine/deoxycytidine kinase. | Thymidine kinase. | 0.778 |
SHM14228.1 | thyA | SAMN05444387_2031 | SAMN05444387_2019 | Deoxyadenosine/deoxycytidine kinase. | Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis. | 0.916 |
SHN10736.1 | SHL48135.1 | SAMN05444387_4139 | SAMN05444387_0707 | dCMP deaminase. | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | 0.909 |
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