Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHM39556.1 | SHN15232.1 | SAMN05444387_2386 | SAMN05444387_4378 | Exonuclease III. | G/U mismatch-specific uracil-DNA glycosylase. | 0.703 |
SHM39556.1 | mutY | SAMN05444387_2386 | SAMN05444387_2091 | Exonuclease III. | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.871 |
SHM39556.1 | polA | SAMN05444387_2386 | SAMN05444387_2170 | Exonuclease III. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.923 |
SHN15218.1 | SHN15232.1 | SAMN05444387_4377 | SAMN05444387_4378 | Hypothetical protein. | G/U mismatch-specific uracil-DNA glycosylase. | 0.420 |
SHN15232.1 | SHM39556.1 | SAMN05444387_4378 | SAMN05444387_2386 | G/U mismatch-specific uracil-DNA glycosylase. | Exonuclease III. | 0.703 |
SHN15232.1 | SHN15218.1 | SAMN05444387_4378 | SAMN05444387_4377 | G/U mismatch-specific uracil-DNA glycosylase. | Hypothetical protein. | 0.420 |
SHN15232.1 | SHN15244.1 | SAMN05444387_4378 | SAMN05444387_4379 | G/U mismatch-specific uracil-DNA glycosylase. | Transcriptional regulator, AraC family. | 0.471 |
SHN15232.1 | mutY | SAMN05444387_4378 | SAMN05444387_2091 | G/U mismatch-specific uracil-DNA glycosylase. | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.736 |
SHN15232.1 | polA | SAMN05444387_4378 | SAMN05444387_2170 | G/U mismatch-specific uracil-DNA glycosylase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.404 |
SHN15232.1 | xth | SAMN05444387_4378 | SAMN05444387_1388 | G/U mismatch-specific uracil-DNA glycosylase. | Exodeoxyribonuclease-3. | 0.703 |
SHN15244.1 | SHN15232.1 | SAMN05444387_4379 | SAMN05444387_4378 | Transcriptional regulator, AraC family. | G/U mismatch-specific uracil-DNA glycosylase. | 0.471 |
mutY | SHM39556.1 | SAMN05444387_2091 | SAMN05444387_2386 | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Exonuclease III. | 0.871 |
mutY | SHN15232.1 | SAMN05444387_2091 | SAMN05444387_4378 | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | G/U mismatch-specific uracil-DNA glycosylase. | 0.736 |
mutY | polA | SAMN05444387_2091 | SAMN05444387_2170 | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.470 |
mutY | xth | SAMN05444387_2091 | SAMN05444387_1388 | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Exodeoxyribonuclease-3. | 0.895 |
polA | SHM39556.1 | SAMN05444387_2170 | SAMN05444387_2386 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | Exonuclease III. | 0.923 |
polA | SHN15232.1 | SAMN05444387_2170 | SAMN05444387_4378 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | G/U mismatch-specific uracil-DNA glycosylase. | 0.404 |
polA | mutY | SAMN05444387_2170 | SAMN05444387_2091 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.470 |
polA | xth | SAMN05444387_2170 | SAMN05444387_1388 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | Exodeoxyribonuclease-3. | 0.923 |
xth | SHN15232.1 | SAMN05444387_1388 | SAMN05444387_4378 | Exodeoxyribonuclease-3. | G/U mismatch-specific uracil-DNA glycosylase. | 0.703 |
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