Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHM14645.1 | SHN19842.1 | SAMN05444387_2043 | SAMN05444387_4621 | Homoserine O-acetyltransferase; Belongs to the AB hydrolase superfamily. MetX family. | Hypothetical protein. | 0.453 |
SHM85164.1 | SHN19842.1 | SAMN05444387_3409 | SAMN05444387_4621 | Phytoene/squalene synthetase. | Hypothetical protein. | 0.407 |
SHN19827.1 | SHN19842.1 | SAMN05444387_4620 | SAMN05444387_4621 | Predicted arabinose efflux permease, MFS family. | Hypothetical protein. | 0.568 |
SHN19827.1 | SHN19855.1 | SAMN05444387_4620 | SAMN05444387_4622 | Predicted arabinose efflux permease, MFS family. | TatD DNase family protein. | 0.616 |
SHN19842.1 | SHM14645.1 | SAMN05444387_4621 | SAMN05444387_2043 | Hypothetical protein. | Homoserine O-acetyltransferase; Belongs to the AB hydrolase superfamily. MetX family. | 0.453 |
SHN19842.1 | SHM85164.1 | SAMN05444387_4621 | SAMN05444387_3409 | Hypothetical protein. | Phytoene/squalene synthetase. | 0.407 |
SHN19842.1 | SHN19827.1 | SAMN05444387_4621 | SAMN05444387_4620 | Hypothetical protein. | Predicted arabinose efflux permease, MFS family. | 0.568 |
SHN19842.1 | SHN19855.1 | SAMN05444387_4621 | SAMN05444387_4622 | Hypothetical protein. | TatD DNase family protein. | 0.782 |
SHN19842.1 | SHN19870.1 | SAMN05444387_4621 | SAMN05444387_4623 | Hypothetical protein. | tRNA A37 threonylcarbamoyladenosine dehydratase. | 0.545 |
SHN19842.1 | SHN19896.1 | SAMN05444387_4621 | SAMN05444387_4625 | Hypothetical protein. | Protein of unknown function. | 0.474 |
SHN19855.1 | SHN19827.1 | SAMN05444387_4622 | SAMN05444387_4620 | TatD DNase family protein. | Predicted arabinose efflux permease, MFS family. | 0.616 |
SHN19855.1 | SHN19842.1 | SAMN05444387_4622 | SAMN05444387_4621 | TatD DNase family protein. | Hypothetical protein. | 0.782 |
SHN19855.1 | SHN19870.1 | SAMN05444387_4622 | SAMN05444387_4623 | TatD DNase family protein. | tRNA A37 threonylcarbamoyladenosine dehydratase. | 0.813 |
SHN19870.1 | SHN19842.1 | SAMN05444387_4623 | SAMN05444387_4621 | tRNA A37 threonylcarbamoyladenosine dehydratase. | Hypothetical protein. | 0.545 |
SHN19870.1 | SHN19855.1 | SAMN05444387_4623 | SAMN05444387_4622 | tRNA A37 threonylcarbamoyladenosine dehydratase. | TatD DNase family protein. | 0.813 |
SHN19896.1 | SHN19842.1 | SAMN05444387_4625 | SAMN05444387_4621 | Protein of unknown function. | Hypothetical protein. | 0.474 |