Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHN16185.1 | SHN16197.1 | SAMN05444387_4454 | SAMN05444387_4455 | Unsaturated rhamnogalacturonyl hydrolase. | Unsaturated rhamnogalacturonyl hydrolase. | 0.722 |
SHN16185.1 | SHN16210.1 | SAMN05444387_4454 | SAMN05444387_4456 | Unsaturated rhamnogalacturonyl hydrolase. | Unsaturated rhamnogalacturonyl hydrolase. | 0.662 |
SHN16185.1 | SHN16258.1 | SAMN05444387_4454 | SAMN05444387_4460 | Unsaturated rhamnogalacturonyl hydrolase. | Lysophospholipase L1. | 0.852 |
SHN16185.1 | SHN22140.1 | SAMN05444387_4454 | SAMN05444387_4764 | Unsaturated rhamnogalacturonyl hydrolase. | Protein of unknown function. | 0.463 |
SHN16185.1 | SHN22149.1 | SAMN05444387_4454 | SAMN05444387_4765 | Unsaturated rhamnogalacturonyl hydrolase. | Glycosyl hydrolases family 28. | 0.691 |
SHN16185.1 | SHN22164.1 | SAMN05444387_4454 | SAMN05444387_4767 | Unsaturated rhamnogalacturonyl hydrolase. | Lysophospholipase L1. | 0.678 |
SHN16185.1 | SHN22246.1 | SAMN05444387_4454 | SAMN05444387_4778 | Unsaturated rhamnogalacturonyl hydrolase. | Lysophospholipase L1. | 0.777 |
SHN16185.1 | SHN22725.1 | SAMN05444387_4454 | SAMN05444387_4812 | Unsaturated rhamnogalacturonyl hydrolase. | Pectinesterase. | 0.812 |
SHN16185.1 | pelA | SAMN05444387_4454 | SAMN05444387_4458 | Unsaturated rhamnogalacturonyl hydrolase. | Pectinesterase. | 0.876 |
SHN16197.1 | SHN16185.1 | SAMN05444387_4455 | SAMN05444387_4454 | Unsaturated rhamnogalacturonyl hydrolase. | Unsaturated rhamnogalacturonyl hydrolase. | 0.722 |
SHN16197.1 | SHN16210.1 | SAMN05444387_4455 | SAMN05444387_4456 | Unsaturated rhamnogalacturonyl hydrolase. | Unsaturated rhamnogalacturonyl hydrolase. | 0.707 |
SHN16197.1 | SHN16258.1 | SAMN05444387_4455 | SAMN05444387_4460 | Unsaturated rhamnogalacturonyl hydrolase. | Lysophospholipase L1. | 0.854 |
SHN16197.1 | SHN22140.1 | SAMN05444387_4455 | SAMN05444387_4764 | Unsaturated rhamnogalacturonyl hydrolase. | Protein of unknown function. | 0.506 |
SHN16197.1 | SHN22149.1 | SAMN05444387_4455 | SAMN05444387_4765 | Unsaturated rhamnogalacturonyl hydrolase. | Glycosyl hydrolases family 28. | 0.694 |
SHN16197.1 | SHN22164.1 | SAMN05444387_4455 | SAMN05444387_4767 | Unsaturated rhamnogalacturonyl hydrolase. | Lysophospholipase L1. | 0.684 |
SHN16197.1 | SHN22246.1 | SAMN05444387_4455 | SAMN05444387_4778 | Unsaturated rhamnogalacturonyl hydrolase. | Lysophospholipase L1. | 0.777 |
SHN16197.1 | SHN22725.1 | SAMN05444387_4455 | SAMN05444387_4812 | Unsaturated rhamnogalacturonyl hydrolase. | Pectinesterase. | 0.812 |
SHN16197.1 | pelA | SAMN05444387_4455 | SAMN05444387_4458 | Unsaturated rhamnogalacturonyl hydrolase. | Pectinesterase. | 0.881 |
SHN16210.1 | SHN16185.1 | SAMN05444387_4456 | SAMN05444387_4454 | Unsaturated rhamnogalacturonyl hydrolase. | Unsaturated rhamnogalacturonyl hydrolase. | 0.662 |
SHN16210.1 | SHN16197.1 | SAMN05444387_4456 | SAMN05444387_4455 | Unsaturated rhamnogalacturonyl hydrolase. | Unsaturated rhamnogalacturonyl hydrolase. | 0.707 |
page 1 of 5