Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHL27181.1 | SHL27215.1 | SAMN05444366_0177 | SAMN05444366_0178 | PD-(D/E)XK nuclease superfamily protein. | Thrombospondin type 3 repeat-containing protein. | 0.677 |
SHL27181.1 | SHL27270.1 | SAMN05444366_0177 | SAMN05444366_0180 | PD-(D/E)XK nuclease superfamily protein. | ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains). | 0.931 |
SHL27181.1 | SHL49453.1 | SAMN05444366_0177 | SAMN05444366_0912 | PD-(D/E)XK nuclease superfamily protein. | Surface antigen. | 0.585 |
SHL27181.1 | SHL72509.1 | SAMN05444366_0177 | SAMN05444366_1338 | PD-(D/E)XK nuclease superfamily protein. | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | 0.850 |
SHL27181.1 | SHL86022.1 | SAMN05444366_0177 | SAMN05444366_1818 | PD-(D/E)XK nuclease superfamily protein. | Protein of unknown function. | 0.719 |
SHL27181.1 | SHM03453.1 | SAMN05444366_0177 | SAMN05444366_2127 | PD-(D/E)XK nuclease superfamily protein. | Family of unknown function. | 0.610 |
SHL27181.1 | SHM03673.1 | SAMN05444366_0177 | SAMN05444366_2134 | PD-(D/E)XK nuclease superfamily protein. | Hypothetical protein. | 0.596 |
SHL27181.1 | SHM71073.1 | SAMN05444366_0177 | SAMN05444366_3870 | PD-(D/E)XK nuclease superfamily protein. | DNA polymerase-3 subunit epsilon. | 0.522 |
SHL27181.1 | SHM75090.1 | SAMN05444366_0177 | SAMN05444366_4032 | PD-(D/E)XK nuclease superfamily protein. | Lipopolysaccharide-assembly. | 0.648 |
SHL27181.1 | recO | SAMN05444366_0177 | SAMN05444366_0184 | PD-(D/E)XK nuclease superfamily protein. | DNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.532 |
SHL27215.1 | SHL27181.1 | SAMN05444366_0178 | SAMN05444366_0177 | Thrombospondin type 3 repeat-containing protein. | PD-(D/E)XK nuclease superfamily protein. | 0.677 |
SHL27215.1 | SHL27270.1 | SAMN05444366_0178 | SAMN05444366_0180 | Thrombospondin type 3 repeat-containing protein. | ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains). | 0.419 |
SHL27270.1 | SHL27181.1 | SAMN05444366_0180 | SAMN05444366_0177 | ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains). | PD-(D/E)XK nuclease superfamily protein. | 0.931 |
SHL27270.1 | SHL27215.1 | SAMN05444366_0180 | SAMN05444366_0178 | ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains). | Thrombospondin type 3 repeat-containing protein. | 0.419 |
SHL27270.1 | SHL49453.1 | SAMN05444366_0180 | SAMN05444366_0912 | ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains). | Surface antigen. | 0.579 |
SHL27270.1 | SHL72509.1 | SAMN05444366_0180 | SAMN05444366_1338 | ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains). | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | 0.569 |
SHL27270.1 | SHL86022.1 | SAMN05444366_0180 | SAMN05444366_1818 | ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains). | Protein of unknown function. | 0.688 |
SHL27270.1 | SHM03453.1 | SAMN05444366_0180 | SAMN05444366_2127 | ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains). | Family of unknown function. | 0.566 |
SHL27270.1 | SHM03673.1 | SAMN05444366_0180 | SAMN05444366_2134 | ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains). | Hypothetical protein. | 0.509 |
SHL27270.1 | SHM71073.1 | SAMN05444366_0180 | SAMN05444366_3870 | ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains). | DNA polymerase-3 subunit epsilon. | 0.406 |
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