STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL28960.1Xylan 1,4-beta-xylosidase. (525 aa)    
Predicted Functional Partners:
SHL28985.1
Beta-glucosidase.
 
     0.804
SHM36779.1
Alpha galactosidase A.
  
     0.711
SHL39127.1
Arabinan endo-1,5-alpha-L-arabinosidase; Belongs to the glycosyl hydrolase 43 family.
  
  
  0.683
SHL28904.1
Aryl-phospho-beta-D-glucosidase BglC, GH1 family; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
   
 0.675
SHL28930.1
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
       0.648
SHM58282.1
Alpha-galactosidase.
  
     0.596
SHM17575.1
Alpha-galactosidase.
  
     0.595
SHM19331.1
Undecaprenyl-phosphate galactose phosphotransferase/putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase.
  
  
 0.538
SHL29069.1
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
    
  0.513
SHM19302.1
Polysaccharide export outer membrane protein.
  
  
 0.511
Your Current Organism:
Flavobacterium saccharophilum
NCBI taxonomy Id: 29534
Other names: ATCC 49530, CIP 104743, Cytophaga saccharophila, F. saccharophilum, IFO 15944, JCM 8520, LMG 8384, LMG:8384, NBRC 15944, NCIMB 2072, strain 024 Agbo and Moss
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.