STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mntHManganese transport protein; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family. (622 aa)    
Predicted Functional Partners:
SHL33122.1
Iron (metal) dependent repressor, DtxR family.
 
  
 0.787
SHL33063.1
Fur family transcriptional regulator, ferric uptake regulator; Belongs to the Fur family.
     
 0.695
SHM38719.1
Signal transduction histidine kinase.
  
 
 0.653
SHM32016.1
Ca2+-transporting ATPase.
  
 0.647
groL
Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
  
 
 0.558
SHL76274.1
Hypothetical protein.
 
  
 0.555
SHL80249.1
Hypothetical protein.
  
 
 0.539
SHL33015.1
Thioredoxin reductase.
  
  
 0.528
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
 
  
 0.504
SHM08872.1
Cyclic pyranopterin monophosphate synthase subunit MoaC.
     
 0.494
Your Current Organism:
Flavobacterium saccharophilum
NCBI taxonomy Id: 29534
Other names: ATCC 49530, CIP 104743, Cytophaga saccharophila, F. saccharophilum, IFO 15944, JCM 8520, LMG 8384, LMG:8384, NBRC 15944, NCIMB 2072, strain 024 Agbo and Moss
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