STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL37777.1Hypothetical protein. (161 aa)    
Predicted Functional Partners:
SHL37808.1
3-hydroxyacyl-[acyl-carrier-protein] dehydratase.
 
     0.916
SHL37898.1
Hypothetical protein.
 
     0.904
SHL37931.1
Outer membrane lipoprotein carrier protein.
 
     0.881
SHL37989.1
3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
     0.868
SHL37866.1
Outer membrane protein beta-barrel domain-containing protein.
 
     0.837
SHL37762.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.834
SHL38470.1
Hypothetical protein.
 
   
 0.828
SHL37843.1
Outer membrane protein beta-barrel domain-containing protein.
 
     0.813
SHL38083.1
Hypothetical protein.
 
     0.800
SHL37711.1
All-trans-retinol 13,14-reductase.
 
     0.788
Your Current Organism:
Flavobacterium saccharophilum
NCBI taxonomy Id: 29534
Other names: ATCC 49530, CIP 104743, Cytophaga saccharophila, F. saccharophilum, IFO 15944, JCM 8520, LMG 8384, LMG:8384, NBRC 15944, NCIMB 2072, strain 024 Agbo and Moss
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.