STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL40790.1Multimeric flavodoxin WrbA. (162 aa)    
Predicted Functional Partners:
SHL40818.1
Iron-regulated ABC transporter membrane component SufB.
  
    0.776
SHL40759.1
Iron-regulated ABC transporter ATPase subunit SufC.
  
    0.758
SHL40730.1
Four helix bundle protein.
       0.621
SHM12051.1
Starvation-inducible DNA-binding protein; Belongs to the Dps family.
  
  
 0.584
SHM83739.1
Starvation-inducible DNA-binding protein; Belongs to the Dps family.
  
  
 0.584
SHM90965.1
LysM domain-containing protein.
   
  
 0.584
SHL40840.1
Iron-sulfur cluster assembly protein; Belongs to the HesB/IscA family.
       0.553
SHL76878.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
   
  
 0.552
SHM83687.1
Catalase; Belongs to the catalase family.
   
  
 0.552
SHL26972.1
Transcriptional regulator, LytTR family.
  
     0.527
Your Current Organism:
Flavobacterium saccharophilum
NCBI taxonomy Id: 29534
Other names: ATCC 49530, CIP 104743, Cytophaga saccharophila, F. saccharophilum, IFO 15944, JCM 8520, LMG 8384, LMG:8384, NBRC 15944, NCIMB 2072, strain 024 Agbo and Moss
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.