STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL41021.1Por secretion system C-terminal sorting domain-containing protein. (1079 aa)    
Predicted Functional Partners:
SHL40987.1
Hypothetical protein.
 
     0.878
SHL29765.1
Delta-60 repeat domain-containing protein.
  
 
  0.654
SHL40968.1
Por secretion system C-terminal sorting domain-containing protein.
 
    
0.603
SHL41056.1
Subtilase family protein; Belongs to the peptidase S8 family.
    
 0.586
SHM84614.1
Gliding motility-associated C-terminal domain-containing protein.
  
 
  0.533
SHM73905.1
Starch-binding associating with outer membrane.
  
 
  0.510
SHL34528.1
Protein involved in gliding motility SprC.
  
 
  0.482
SHL91082.1
Delta-60 repeat domain-containing protein/Por secretion system C-terminal sorting domain-containing protein.
  
 
  0.478
SHM78669.1
Gliding motility-associated C-terminal domain-containing protein.
  
 
  0.464
SHM74677.1
Peptidogalycan biosysnthesis/recognition.
  
     0.450
Your Current Organism:
Flavobacterium saccharophilum
NCBI taxonomy Id: 29534
Other names: ATCC 49530, CIP 104743, Cytophaga saccharophila, F. saccharophilum, IFO 15944, JCM 8520, LMG 8384, LMG:8384, NBRC 15944, NCIMB 2072, strain 024 Agbo and Moss
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.