STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL49674.1Glycogen recognition site of AMP-activated protein kinase. (98 aa)    
Predicted Functional Partners:
SHL66389.1
Glucose-1-phosphate adenylyltransferase.
  
 
 0.748
SHL30345.1
Starch synthase.
 
 
 0.709
SHL85860.1
Glycosidase.
 
 
 0.693
glgA
Starch synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
  
 
 0.667
SHM56090.1
Phosphomannomutase.
  
 
 0.468
SHM91599.1
Phosphomannomutase.
  
 
 0.468
SHL52349.1
Glycosyltransferase involved in cell wall bisynthesis.
  
  0.461
SHL49644.1
2TM domain-containing protein.
       0.456
SHL47614.1
Alpha-amylase.
 
 
 0.448
SHL49608.1
Dihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis.
       0.447
Your Current Organism:
Flavobacterium saccharophilum
NCBI taxonomy Id: 29534
Other names: ATCC 49530, CIP 104743, Cytophaga saccharophila, F. saccharophilum, IFO 15944, JCM 8520, LMG 8384, LMG:8384, NBRC 15944, NCIMB 2072, strain 024 Agbo and Moss
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.