Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHL22329.1 | SHL51281.1 | SAMN05444366_0010 | SAMN05444366_0966 | Outer membrane transport energization protein TonB. | Outer membrane receptor proteins, mostly Fe transport. | 0.461 |
SHL22329.1 | SHM01960.1 | SAMN05444366_0010 | SAMN05444366_2076 | Outer membrane transport energization protein TonB. | WD40-like Beta Propeller Repeat. | 0.846 |
SHL22329.1 | SHM83575.1 | SAMN05444366_0010 | SAMN05444366_4253 | Outer membrane transport energization protein TonB. | Hypothetical protein. | 0.792 |
SHL48906.1 | SHL51281.1 | SAMN05444366_0893 | SAMN05444366_0966 | Antitoxin component YwqK of the YwqJK toxin-antitoxin module. | Outer membrane receptor proteins, mostly Fe transport. | 0.464 |
SHL48906.1 | SHM01960.1 | SAMN05444366_0893 | SAMN05444366_2076 | Antitoxin component YwqK of the YwqJK toxin-antitoxin module. | WD40-like Beta Propeller Repeat. | 0.863 |
SHL48906.1 | SHM83575.1 | SAMN05444366_0893 | SAMN05444366_4253 | Antitoxin component YwqK of the YwqJK toxin-antitoxin module. | Hypothetical protein. | 0.840 |
SHL51281.1 | SHL22329.1 | SAMN05444366_0966 | SAMN05444366_0010 | Outer membrane receptor proteins, mostly Fe transport. | Outer membrane transport energization protein TonB. | 0.461 |
SHL51281.1 | SHL48906.1 | SAMN05444366_0966 | SAMN05444366_0893 | Outer membrane receptor proteins, mostly Fe transport. | Antitoxin component YwqK of the YwqJK toxin-antitoxin module. | 0.464 |
SHL51281.1 | SHL51304.1 | SAMN05444366_0966 | SAMN05444366_0967 | Outer membrane receptor proteins, mostly Fe transport. | Protein of unknown function. | 0.929 |
SHL51281.1 | SHL51341.1 | SAMN05444366_0966 | SAMN05444366_0968 | Outer membrane receptor proteins, mostly Fe transport. | Uncharacterized iron-regulated membrane protein. | 0.701 |
SHL51281.1 | SHL51661.1 | SAMN05444366_0966 | SAMN05444366_0979 | Outer membrane receptor proteins, mostly Fe transport. | Hypothetical protein. | 0.539 |
SHL51281.1 | SHL68748.1 | SAMN05444366_0966 | SAMN05444366_1207 | Outer membrane receptor proteins, mostly Fe transport. | Hypothetical protein. | 0.461 |
SHL51281.1 | SHM01960.1 | SAMN05444366_0966 | SAMN05444366_2076 | Outer membrane receptor proteins, mostly Fe transport. | WD40-like Beta Propeller Repeat. | 0.529 |
SHL51281.1 | SHM20825.1 | SAMN05444366_0966 | SAMN05444366_2724 | Outer membrane receptor proteins, mostly Fe transport. | Hypothetical protein. | 0.461 |
SHL51281.1 | SHM59031.1 | SAMN05444366_0966 | SAMN05444366_3597 | Outer membrane receptor proteins, mostly Fe transport. | Outer membrane transport energization protein TonB. | 0.461 |
SHL51281.1 | SHM83575.1 | SAMN05444366_0966 | SAMN05444366_4253 | Outer membrane receptor proteins, mostly Fe transport. | Hypothetical protein. | 0.523 |
SHL51304.1 | SHL51281.1 | SAMN05444366_0967 | SAMN05444366_0966 | Protein of unknown function. | Outer membrane receptor proteins, mostly Fe transport. | 0.929 |
SHL51304.1 | SHL51341.1 | SAMN05444366_0967 | SAMN05444366_0968 | Protein of unknown function. | Uncharacterized iron-regulated membrane protein. | 0.736 |
SHL51341.1 | SHL51281.1 | SAMN05444366_0968 | SAMN05444366_0966 | Uncharacterized iron-regulated membrane protein. | Outer membrane receptor proteins, mostly Fe transport. | 0.701 |
SHL51341.1 | SHL51304.1 | SAMN05444366_0968 | SAMN05444366_0967 | Uncharacterized iron-regulated membrane protein. | Protein of unknown function. | 0.736 |
page 1 of 3