Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SHL44638.1 | SHL50368.1 | SAMN05444366_0757 | SAMN05444366_0938 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Homoserine dehydrogenase. | 0.598 |
| SHL44638.1 | SHM08077.1 | SAMN05444366_0757 | SAMN05444366_2282 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | tRNA (cmo5U34)-methyltransferase. | 0.686 |
| SHL44638.1 | SHM41984.1 | SAMN05444366_0757 | SAMN05444366_3215 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Amino acid adenylation domain-containing protein. | 0.943 |
| SHL44638.1 | SHM42013.1 | SAMN05444366_0757 | SAMN05444366_3216 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Amino acid adenylation domain-containing protein. | 0.951 |
| SHL44638.1 | SHM64495.1 | SAMN05444366_0757 | SAMN05444366_3804 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Glycine dehydrogenase; Belongs to the GcvP family. | 0.407 |
| SHL50368.1 | SHL44638.1 | SAMN05444366_0938 | SAMN05444366_0757 | Homoserine dehydrogenase. | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.598 |
| SHL50368.1 | SHM08077.1 | SAMN05444366_0938 | SAMN05444366_2282 | Homoserine dehydrogenase. | tRNA (cmo5U34)-methyltransferase. | 0.443 |
| SHL50368.1 | SHM42013.1 | SAMN05444366_0938 | SAMN05444366_3216 | Homoserine dehydrogenase. | Amino acid adenylation domain-containing protein. | 0.749 |
| SHL50368.1 | SHM78940.1 | SAMN05444366_0938 | SAMN05444366_4175 | Homoserine dehydrogenase. | Phosphoserine phosphatase. | 0.957 |
| SHL55143.1 | SHM08077.1 | SAMN05444366_1112 | SAMN05444366_2282 | Cytochrome P450. | tRNA (cmo5U34)-methyltransferase. | 0.654 |
| SHL55143.1 | SHM41984.1 | SAMN05444366_1112 | SAMN05444366_3215 | Cytochrome P450. | Amino acid adenylation domain-containing protein. | 0.999 |
| SHL55143.1 | SHM42013.1 | SAMN05444366_1112 | SAMN05444366_3216 | Cytochrome P450. | Amino acid adenylation domain-containing protein. | 0.967 |
| SHL55143.1 | SHM59352.1 | SAMN05444366_1112 | SAMN05444366_3608 | Cytochrome P450. | Cytochrome P450. | 0.587 |
| SHM08077.1 | SHL44638.1 | SAMN05444366_2282 | SAMN05444366_0757 | tRNA (cmo5U34)-methyltransferase. | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.686 |
| SHM08077.1 | SHL50368.1 | SAMN05444366_2282 | SAMN05444366_0938 | tRNA (cmo5U34)-methyltransferase. | Homoserine dehydrogenase. | 0.443 |
| SHM08077.1 | SHL55143.1 | SAMN05444366_2282 | SAMN05444366_1112 | tRNA (cmo5U34)-methyltransferase. | Cytochrome P450. | 0.654 |
| SHM08077.1 | SHM08114.1 | SAMN05444366_2282 | SAMN05444366_2283 | tRNA (cmo5U34)-methyltransferase. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.558 |
| SHM08077.1 | SHM41984.1 | SAMN05444366_2282 | SAMN05444366_3215 | tRNA (cmo5U34)-methyltransferase. | Amino acid adenylation domain-containing protein. | 0.815 |
| SHM08077.1 | SHM42013.1 | SAMN05444366_2282 | SAMN05444366_3216 | tRNA (cmo5U34)-methyltransferase. | Amino acid adenylation domain-containing protein. | 0.764 |
| SHM08077.1 | SHM52675.1 | SAMN05444366_2282 | SAMN05444366_3368 | tRNA (cmo5U34)-methyltransferase. | Hypothetical protein; Belongs to the cytochrome P450 family. | 0.654 |
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