STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM18231.1Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR. (420 aa)    
Predicted Functional Partners:
SHM38719.1
Signal transduction histidine kinase.
  
0.986
SHM18272.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 
  0.975
SHL24068.1
Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP.
  
  0.973
SHM11017.1
PAS domain S-box-containing protein.
 
0.947
SHL80249.1
Hypothetical protein.
 
0.931
SHL24037.1
Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR.
 
 
0.902
SHM13135.1
Hpt domain-containing protein.
 
0.901
SHM91127.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 
  0.891
SHM13110.1
Response regulator receiver domain-containing protein.
 
  0.884
SHL82974.1
Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR.
  
  
 
0.881
Your Current Organism:
Flavobacterium saccharophilum
NCBI taxonomy Id: 29534
Other names: ATCC 49530, CIP 104743, Cytophaga saccharophila, F. saccharophilum, IFO 15944, JCM 8520, LMG 8384, LMG:8384, NBRC 15944, NCIMB 2072, strain 024 Agbo and Moss
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.