STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM19331.1Undecaprenyl-phosphate galactose phosphotransferase/putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase. (472 aa)    
Predicted Functional Partners:
SHM19273.1
Capsular exopolysaccharide family.
 
 
 0.998
SHM42876.1
Capsular exopolysaccharide family.
 
 
 0.997
SHM62323.1
Protein involved in gliding motility EpsB.
 
 
 0.997
SHL36214.1
O-Antigen ligase.
  
  
 0.971
SHM19302.1
Polysaccharide export outer membrane protein.
 
 
 0.968
SHM42841.1
Polysaccharide export outer membrane protein; Manually curated.
 
 
 0.940
SHM62351.1
Protein involved in gliding motility EpsA.
 
 
 0.938
SHM19361.1
N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase; Belongs to the glycosyltransferase 26 family.
  
 0.934
SHM62128.1
Protein involved in polysaccharide export, contains SLBB domain of the beta-grasp fold.
  
 
 0.926
SHM42285.1
Mannose-1-phosphate guanylyltransferase.
  
 
 0.919
Your Current Organism:
Flavobacterium saccharophilum
NCBI taxonomy Id: 29534
Other names: ATCC 49530, CIP 104743, Cytophaga saccharophila, F. saccharophilum, IFO 15944, JCM 8520, LMG 8384, LMG:8384, NBRC 15944, NCIMB 2072, strain 024 Agbo and Moss
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.