STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM19509.1Acetyltransferase (isoleucine patch superfamily). (226 aa)    
Predicted Functional Partners:
SHM19485.1
Acetyltransferase (isoleucine patch superfamily).
 
    
0.779
SHM42718.1
Putative colanic acid biosynthesis acetyltransferase WcaF.
  
     0.773
SHM19331.1
Undecaprenyl-phosphate galactose phosphotransferase/putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase.
  
  
 0.723
SHM19394.1
Hypothetical protein.
      0.671
SHM19427.1
Glycosyltransferase, GT2 family.
 
     0.659
SHM19570.1
Polysaccharide pyruvyl transferase.
 
  
 0.629
SHM19457.1
EpsG family protein.
       0.604
SHM19539.1
Glycosyltransferase, GT2 family.
  
    0.553
SHM19621.1
Na+-driven multidrug efflux pump.
 
    0.452
SHM19361.1
N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase; Belongs to the glycosyltransferase 26 family.
       0.441
Your Current Organism:
Flavobacterium saccharophilum
NCBI taxonomy Id: 29534
Other names: ATCC 49530, CIP 104743, Cytophaga saccharophila, F. saccharophilum, IFO 15944, JCM 8520, LMG 8384, LMG:8384, NBRC 15944, NCIMB 2072, strain 024 Agbo and Moss
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.