STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM30975.1alpha-N-arabinofuranosidase; Belongs to the glycosyl hydrolase 43 family. (572 aa)    
Predicted Functional Partners:
SHM31005.1
Enterochelin esterase.
 
  
  0.905
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
 
 
 0.806
SHM13730.1
Endo-1,4-beta-xylanase.
 
  
 0.796
SHL78477.1
Carbohydrate binding domain-containing protein.
 
  
 0.779
SHM13818.1
Alpha-glucuronidase; Belongs to the glycosyl hydrolase 67 family.
 
   
 0.742
SHM31035.1
alpha-L-fucosidase 2.
 
     0.740
SHM31612.1
Enterochelin esterase.
 
  
  0.727
SHL79169.1
Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
  
  
 
0.723
SHM31092.1
Glycosyl-hydrolase 97 C-terminal, oligomerisation.
 
     0.711
SHM31064.1
Beta-glucosidase.
 
     0.678
Your Current Organism:
Flavobacterium saccharophilum
NCBI taxonomy Id: 29534
Other names: ATCC 49530, CIP 104743, Cytophaga saccharophila, F. saccharophilum, IFO 15944, JCM 8520, LMG 8384, LMG:8384, NBRC 15944, NCIMB 2072, strain 024 Agbo and Moss
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.