STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM32132.1PAS domain S-box-containing protein. (395 aa)    
Predicted Functional Partners:
SHL80249.1
Hypothetical protein.
 
0.999
SHM11017.1
PAS domain S-box-containing protein.
 
0.999
SHM38719.1
Signal transduction histidine kinase.
 
0.999
SHM32108.1
cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases.
 0.994
SHM13135.1
Hpt domain-containing protein.
 
0.993
SHL79452.1
Signal transduction histidine kinase.
 
0.985
SHL75952.1
His Kinase A (phospho-acceptor) domain-containing protein.
0.981
SHM31122.1
Signal transduction histidine kinase.
 
0.981
SHM32495.1
Signal transduction histidine kinase.
 
0.981
SHM36577.1
Two component regulator propeller.
 
0.981
Your Current Organism:
Flavobacterium saccharophilum
NCBI taxonomy Id: 29534
Other names: ATCC 49530, CIP 104743, Cytophaga saccharophila, F. saccharophilum, IFO 15944, JCM 8520, LMG 8384, LMG:8384, NBRC 15944, NCIMB 2072, strain 024 Agbo and Moss
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.