STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM35047.1Cupin domain-containing protein. (147 aa)    
Predicted Functional Partners:
SHM35077.1
Gluconate kinase, FGGY family; Belongs to the FGGY kinase family.
  
    0.759
SHM36270.1
Pectinesterase.
  
     0.626
SHM35021.1
Zinc-binding alcohol dehydrogenase family protein; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily.
  
    0.534
SHM33982.1
Hypothetical protein.
  
     0.506
SHL41791.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.499
SHM42081.1
Hypothetical protein.
  
     0.453
SHM17616.1
IPT/TIG domain-containing protein.
  
     0.444
SHM36170.1
Protein of unknown function.
 
     0.440
SHM17933.1
Mannan endo-1,4-beta-mannosidase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.426
SHM57437.1
Protein of unknown function.
  
     0.426
Your Current Organism:
Flavobacterium saccharophilum
NCBI taxonomy Id: 29534
Other names: ATCC 49530, CIP 104743, Cytophaga saccharophila, F. saccharophilum, IFO 15944, JCM 8520, LMG 8384, LMG:8384, NBRC 15944, NCIMB 2072, strain 024 Agbo and Moss
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.