STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM36747.1Beta-galactosidase/beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family. (807 aa)    
Predicted Functional Partners:
SHM58282.1
Alpha-galactosidase.
  
 
  0.733
SHM17575.1
Alpha-galactosidase.
  
 
  0.730
xylA
D-xylose isomerase; Belongs to the xylose isomerase family.
     
 0.722
SHM40510.1
Beta-galactosidase.
  
  
 
0.718
SHM37208.1
YhcH/YjgK/YiaL family protein.
   
  0.608
SHM36779.1
Alpha galactosidase A.
  
  
  0.574
SHM53714.1
Beta-galactosidase.
  
 
  0.574
SHL29350.1
6-phosphofructokinase 2; Belongs to the carbohydrate kinase PfkB family.
   
    0.525
SHM36707.1
O-Glycosyl hydrolase.
  
 
  0.507
SHM41213.1
Beta galactosidase small chain.
  
  
 
0.499
Your Current Organism:
Flavobacterium saccharophilum
NCBI taxonomy Id: 29534
Other names: ATCC 49530, CIP 104743, Cytophaga saccharophila, F. saccharophilum, IFO 15944, JCM 8520, LMG 8384, LMG:8384, NBRC 15944, NCIMB 2072, strain 024 Agbo and Moss
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.