STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM58282.1Alpha-galactosidase. (402 aa)    
Predicted Functional Partners:
SHM53714.1
Beta-galactosidase.
 
  
 0.793
SHM36779.1
Alpha galactosidase A.
  
  
 
0.737
SHM36747.1
Beta-galactosidase/beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
  
 
  0.733
SHL66451.1
Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
    
 0.723
SHM40510.1
Beta-galactosidase.
  
 
  0.718
SHM29790.1
Alpha-glucosidase.
  
  
  0.686
SHM58306.1
PS-10 peptidase S37.
       0.682
SHM17933.1
Mannan endo-1,4-beta-mannosidase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
  0.674
SHM92046.1
Beta-fructofuranosidase.
    
 0.660
SHM54164.1
Beta galactosidase small chain.
  
 
  0.654
Your Current Organism:
Flavobacterium saccharophilum
NCBI taxonomy Id: 29534
Other names: ATCC 49530, CIP 104743, Cytophaga saccharophila, F. saccharophilum, IFO 15944, JCM 8520, LMG 8384, LMG:8384, NBRC 15944, NCIMB 2072, strain 024 Agbo and Moss
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.