STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM74877.1Protein involved in gliding motility GldM. (512 aa)    
Predicted Functional Partners:
SHM74908.1
Protein involved in gliding motility GldL.
 
 
 
 0.999
SHM74849.1
Protein involved in gliding motility GldN.
 
   
 0.952
SHM74936.1
Protein involved in gliding motility GldK.
 
   
 0.917
SHM74826.1
Gliding motility associated protien GldN.
 
   
 0.900
SHL36708.1
Protein involved in gliding motility SprE.
  
   
 0.854
SHM80594.1
Protein involved in gliding motility SprA.
  
   
 0.845
SHL49535.1
Probable protein-translocating porin PorT.
 
   
 0.830
SHM76405.1
Protein involved in gliding motility GldB.
  
   
 0.809
SHL52626.1
Protein involved in gliding motility GldJ.
 
   
 0.804
SHL52043.1
Protein involved in gliding motility GldD.
  
   
 0.760
Your Current Organism:
Flavobacterium saccharophilum
NCBI taxonomy Id: 29534
Other names: ATCC 49530, CIP 104743, Cytophaga saccharophila, F. saccharophilum, IFO 15944, JCM 8520, LMG 8384, LMG:8384, NBRC 15944, NCIMB 2072, strain 024 Agbo and Moss
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.