STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM85531.1MoxR-like ATPase. (337 aa)    
Predicted Functional Partners:
SHM85557.1
Uncharacterized conserved protein, DUF58 family, contains vWF domain.
 
  
 0.780
SHL27740.1
Protein of unknown function DUF58.
  
 0.745
SHM85457.1
Uncharacterized membrane protein SpoIIM, required for sporulation.
 
    0.626
SHM85480.1
Hypothetical protein.
 
    0.623
SHL27831.1
Ca-activated chloride channel family protein.
 
 
 0.618
SHM85507.1
Protein of unknown function.
 
    0.596
SHL27800.1
Ca-activated chloride channel family protein.
 
 
 0.595
SHM06497.1
Ca-activated chloride channel family protein.
 
 
 0.593
SHM85433.1
Uncharacterized membrane protein YckC, RDD family.
 
    0.547
SHM80634.1
Allosteric NADP-dependent malic enzyme.
  
    0.492
Your Current Organism:
Flavobacterium saccharophilum
NCBI taxonomy Id: 29534
Other names: ATCC 49530, CIP 104743, Cytophaga saccharophila, F. saccharophilum, IFO 15944, JCM 8520, LMG 8384, LMG:8384, NBRC 15944, NCIMB 2072, strain 024 Agbo and Moss
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