Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SHL48692.1 | SHL83161.1 | SAMN05444366_0886 | SAMN05444366_1713 | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | RNA polymerase Rpb6. | 0.998 |
| SHL48692.1 | SHM85679.1 | SAMN05444366_0886 | SAMN05444366_4350 | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.477 |
| SHL48692.1 | SHM85730.1 | SAMN05444366_0886 | SAMN05444366_4352 | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Fur family transcriptional regulator, ferric uptake regulator; Belongs to the Fur family. | 0.732 |
| SHL48692.1 | rpoA | SAMN05444366_0886 | SAMN05444366_3731 | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| SHL48692.1 | rpoB | SAMN05444366_0886 | SAMN05444366_3893 | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| SHL48692.1 | rpoC | SAMN05444366_0886 | SAMN05444366_3892 | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.998 |
| SHL83161.1 | SHL48692.1 | SAMN05444366_1713 | SAMN05444366_0886 | RNA polymerase Rpb6. | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.998 |
| SHL83161.1 | SHM85730.1 | SAMN05444366_1713 | SAMN05444366_4352 | RNA polymerase Rpb6. | Fur family transcriptional regulator, ferric uptake regulator; Belongs to the Fur family. | 0.656 |
| SHL83161.1 | rpoA | SAMN05444366_1713 | SAMN05444366_3731 | RNA polymerase Rpb6. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| SHL83161.1 | rpoB | SAMN05444366_1713 | SAMN05444366_3893 | RNA polymerase Rpb6. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| SHL83161.1 | rpoC | SAMN05444366_1713 | SAMN05444366_3892 | RNA polymerase Rpb6. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| SHM20315.1 | SHM85730.1 | SAMN05444366_2707 | SAMN05444366_4352 | Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin). | Fur family transcriptional regulator, ferric uptake regulator; Belongs to the Fur family. | 0.589 |
| SHM85679.1 | SHL48692.1 | SAMN05444366_4350 | SAMN05444366_0886 | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.477 |
| SHM85679.1 | SHM85730.1 | SAMN05444366_4350 | SAMN05444366_4352 | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | Fur family transcriptional regulator, ferric uptake regulator; Belongs to the Fur family. | 0.619 |
| SHM85679.1 | purA | SAMN05444366_4350 | SAMN05444366_4353 | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.493 |
| SHM85730.1 | SHL48692.1 | SAMN05444366_4352 | SAMN05444366_0886 | Fur family transcriptional regulator, ferric uptake regulator; Belongs to the Fur family. | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.732 |
| SHM85730.1 | SHL83161.1 | SAMN05444366_4352 | SAMN05444366_1713 | Fur family transcriptional regulator, ferric uptake regulator; Belongs to the Fur family. | RNA polymerase Rpb6. | 0.656 |
| SHM85730.1 | SHM20315.1 | SAMN05444366_4352 | SAMN05444366_2707 | Fur family transcriptional regulator, ferric uptake regulator; Belongs to the Fur family. | Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin). | 0.589 |
| SHM85730.1 | SHM85679.1 | SAMN05444366_4352 | SAMN05444366_4350 | Fur family transcriptional regulator, ferric uptake regulator; Belongs to the Fur family. | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.619 |
| SHM85730.1 | SHM87266.1 | SAMN05444366_4352 | SAMN05444366_4419 | Fur family transcriptional regulator, ferric uptake regulator; Belongs to the Fur family. | Glutamate synthase (NADH) large subunit. | 0.859 |
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