STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM86202.1Leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (368 aa)    
Predicted Functional Partners:
SHM87266.1
Glutamate synthase (NADH) large subunit.
  
 0.999
SHL69846.1
2-oxoisovalerate dehydrogenase E1 component.
  
 
 0.973
SHM91307.1
Pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component.
  
 
 0.924
SHM12165.1
Branched-chain amino acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.914
SHM56987.1
Branched-chain amino acid aminotransferase.
  
 
 0.914
ilvD
Dihydroxyacid dehydratase; Belongs to the IlvD/Edd family.
   
 0.913
SHL70891.1
2-isopropylmalate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family.
   
 
 0.857
SHL90568.1
Glutamate synthase domain-containing protein 2; Belongs to the glutamate synthase family.
  
 0.811
SHM64495.1
Glycine dehydrogenase; Belongs to the GcvP family.
   
 0.744
SHM08746.1
Assimilatory nitrate reductase (NADH) beta subunit /assimilatory nitrate reductase (NADH) alpha subunit apoprotein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 
 0.721
Your Current Organism:
Flavobacterium saccharophilum
NCBI taxonomy Id: 29534
Other names: ATCC 49530, CIP 104743, Cytophaga saccharophila, F. saccharophilum, IFO 15944, JCM 8520, LMG 8384, LMG:8384, NBRC 15944, NCIMB 2072, strain 024 Agbo and Moss
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