Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHM10239.1 | SHM16391.1 | SAMN05444366_2354 | SAMN05444366_2577 | Hypothetical protein. | Hypothetical protein. | 0.483 |
SHM10239.1 | SHM16424.1 | SAMN05444366_2354 | SAMN05444366_2578 | Hypothetical protein. | Outer membrane cobalamin receptor protein. | 0.451 |
SHM10239.1 | SHM86823.1 | SAMN05444366_2354 | SAMN05444366_4401 | Hypothetical protein. | Protein of unknown function. | 0.431 |
SHM16391.1 | SHM10239.1 | SAMN05444366_2577 | SAMN05444366_2354 | Hypothetical protein. | Hypothetical protein. | 0.483 |
SHM16391.1 | SHM16424.1 | SAMN05444366_2577 | SAMN05444366_2578 | Hypothetical protein. | Outer membrane cobalamin receptor protein. | 0.883 |
SHM16391.1 | SHM86823.1 | SAMN05444366_2577 | SAMN05444366_4401 | Hypothetical protein. | Protein of unknown function. | 0.562 |
SHM16424.1 | SHM10239.1 | SAMN05444366_2578 | SAMN05444366_2354 | Outer membrane cobalamin receptor protein. | Hypothetical protein. | 0.451 |
SHM16424.1 | SHM16391.1 | SAMN05444366_2578 | SAMN05444366_2577 | Outer membrane cobalamin receptor protein. | Hypothetical protein. | 0.883 |
SHM16424.1 | SHM86760.1 | SAMN05444366_2578 | SAMN05444366_4398 | Outer membrane cobalamin receptor protein. | Protein of unknown function. | 0.408 |
SHM16424.1 | SHM86823.1 | SAMN05444366_2578 | SAMN05444366_4401 | Outer membrane cobalamin receptor protein. | Protein of unknown function. | 0.543 |
SHM31287.1 | SHM86823.1 | SAMN05444366_2848 | SAMN05444366_4401 | Repeat domain-containing protein. | Protein of unknown function. | 0.510 |
SHM86723.1 | SHM86760.1 | SAMN05444366_4397 | SAMN05444366_4398 | Outer membrane receptor proteins, mostly Fe transport. | Protein of unknown function. | 0.912 |
SHM86723.1 | SHM86783.1 | SAMN05444366_4397 | SAMN05444366_4399 | Outer membrane receptor proteins, mostly Fe transport. | AraC family transcriptional regulator. | 0.638 |
SHM86723.1 | SHM86809.1 | SAMN05444366_4397 | SAMN05444366_4400 | Outer membrane receptor proteins, mostly Fe transport. | Hypothetical protein. | 0.588 |
SHM86723.1 | SHM86823.1 | SAMN05444366_4397 | SAMN05444366_4401 | Outer membrane receptor proteins, mostly Fe transport. | Protein of unknown function. | 0.558 |
SHM86760.1 | SHM16424.1 | SAMN05444366_4398 | SAMN05444366_2578 | Protein of unknown function. | Outer membrane cobalamin receptor protein. | 0.408 |
SHM86760.1 | SHM86723.1 | SAMN05444366_4398 | SAMN05444366_4397 | Protein of unknown function. | Outer membrane receptor proteins, mostly Fe transport. | 0.912 |
SHM86760.1 | SHM86783.1 | SAMN05444366_4398 | SAMN05444366_4399 | Protein of unknown function. | AraC family transcriptional regulator. | 0.757 |
SHM86760.1 | SHM86809.1 | SAMN05444366_4398 | SAMN05444366_4400 | Protein of unknown function. | Hypothetical protein. | 0.695 |
SHM86760.1 | SHM86823.1 | SAMN05444366_4398 | SAMN05444366_4401 | Protein of unknown function. | Protein of unknown function. | 0.713 |
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