Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHL42309.1 | SHL43408.1 | SAMN05444366_0683 | SAMN05444366_0721 | Thiol-disulfide isomerase or thioredoxin. | Vitamin K epoxide reductase family protein. | 0.483 |
SHL42309.1 | SHM87725.1 | SAMN05444366_0683 | SAMN05444366_4439 | Thiol-disulfide isomerase or thioredoxin. | Thiol:disulfide interchange protein DsbD. | 0.668 |
SHL42309.1 | msrA | SAMN05444366_0683 | SAMN05444366_1202 | Thiol-disulfide isomerase or thioredoxin. | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.724 |
SHL42309.1 | msrA-2 | SAMN05444366_0683 | SAMN05444366_3643 | Thiol-disulfide isomerase or thioredoxin. | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.977 |
SHL43408.1 | SHL42309.1 | SAMN05444366_0721 | SAMN05444366_0683 | Vitamin K epoxide reductase family protein. | Thiol-disulfide isomerase or thioredoxin. | 0.483 |
SHL43408.1 | SHL84121.1 | SAMN05444366_0721 | SAMN05444366_1746 | Vitamin K epoxide reductase family protein. | Thiol-disulfide isomerase or thioredoxin. | 0.483 |
SHL43408.1 | SHM07080.1 | SAMN05444366_0721 | SAMN05444366_2248 | Vitamin K epoxide reductase family protein. | Peroxiredoxin. | 0.545 |
SHL43408.1 | SHM09262.1 | SAMN05444366_0721 | SAMN05444366_2321 | Vitamin K epoxide reductase family protein. | Rhodanese-related sulfurtransferase. | 0.611 |
SHL43408.1 | SHM87725.1 | SAMN05444366_0721 | SAMN05444366_4439 | Vitamin K epoxide reductase family protein. | Thiol:disulfide interchange protein DsbD. | 0.756 |
SHL54682.1 | SHM87725.1 | SAMN05444366_1092 | SAMN05444366_4439 | Protein of unknown function. | Thiol:disulfide interchange protein DsbD. | 0.655 |
SHL84121.1 | SHL43408.1 | SAMN05444366_1746 | SAMN05444366_0721 | Thiol-disulfide isomerase or thioredoxin. | Vitamin K epoxide reductase family protein. | 0.483 |
SHL84121.1 | SHM87725.1 | SAMN05444366_1746 | SAMN05444366_4439 | Thiol-disulfide isomerase or thioredoxin. | Thiol:disulfide interchange protein DsbD. | 0.688 |
SHL84121.1 | msrA | SAMN05444366_1746 | SAMN05444366_1202 | Thiol-disulfide isomerase or thioredoxin. | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.724 |
SHL84121.1 | msrA-2 | SAMN05444366_1746 | SAMN05444366_3643 | Thiol-disulfide isomerase or thioredoxin. | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.977 |
SHL87047.1 | SHM87725.1 | SAMN05444366_1859 | SAMN05444366_4439 | Peptide-methionine (R)-S-oxide reductase. | Thiol:disulfide interchange protein DsbD. | 0.622 |
SHL87047.1 | msrA | SAMN05444366_1859 | SAMN05444366_1202 | Peptide-methionine (R)-S-oxide reductase. | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.988 |
SHL87047.1 | msrA-2 | SAMN05444366_1859 | SAMN05444366_3643 | Peptide-methionine (R)-S-oxide reductase. | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.988 |
SHM07080.1 | SHL43408.1 | SAMN05444366_2248 | SAMN05444366_0721 | Peroxiredoxin. | Vitamin K epoxide reductase family protein. | 0.545 |
SHM07080.1 | SHM87725.1 | SAMN05444366_2248 | SAMN05444366_4439 | Peroxiredoxin. | Thiol:disulfide interchange protein DsbD. | 0.665 |
SHM07080.1 | msrA | SAMN05444366_2248 | SAMN05444366_1202 | Peroxiredoxin. | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.724 |
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