STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FLB_00350Pregnancy-associated plasma protein-A. (318 aa)    
Predicted Functional Partners:
luxQ_1
Autoinducer 2 sensor kinase/phosphatase LuxQ.
  
 0.889
rpfC_2
Sensory/regulatory protein RpfC.
    
 0.866
luxQ_3
Autoinducer 2 sensor kinase/phosphatase LuxQ.
   
 0.863
ribBA
Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
  
 
 0.773
rpfC_1
Sensory/regulatory protein RpfC.
    
 0.736
luxQ_2
Autoinducer 2 sensor kinase/phosphatase LuxQ.
    
 0.736
cph1
Phytochrome-like protein cph1.
    
 0.662
clpC
Negative regulator of genetic competence ClpC/MecB; Belongs to the ClpA/ClpB family.
  
 
 0.564
FLB_00320
Hypothetical protein.
       0.556
FLB_00330
Hypothetical protein.
       0.556
Your Current Organism:
Flavobacterium succinicans
NCBI taxonomy Id: 29536
Other names: CIP 104744, Cytophaga succinicans, DSM 4002, F. succinicans, Flavobacterium sp. DD5b, Flexibacter succinicans, IFO 14905, JCM 21151, LMG 10402, LMG:10402, NBRC 14905, NCIMB 2277, strain 8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.