STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FLB_01030Prenyltransferase. (308 aa)    
Predicted Functional Partners:
pcrB
Geranylgeranylglyceryl phosphate synthase; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P).
 
  
 0.978
FLB_16630
Prenyltransferase.
  
  
 
0.834
maf
Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
       0.786
FLB_01010
Mechanosensitive channel MscS.
       0.764
FLB_16940
Beta-monoglucosyldiacylglycerol synthase.
 
     0.750
FLB_25820
Hypothetical protein.
  
     0.749
FLB_14670
O-methyltransferase.
  
   
 0.742
sdsA
All-trans-nonaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 
 0.718
pgaC
poly-beta-1,6-N-acetyl-D-glucosamine synthase.
 
     0.707
bamA_1
Outer membrane protein assembly factor BamA.
 
     0.681
Your Current Organism:
Flavobacterium succinicans
NCBI taxonomy Id: 29536
Other names: CIP 104744, Cytophaga succinicans, DSM 4002, F. succinicans, Flavobacterium sp. DD5b, Flexibacter succinicans, IFO 14905, JCM 21151, LMG 10402, LMG:10402, NBRC 14905, NCIMB 2277, strain 8
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