STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xynZEndo-1,4-beta-xylanase Z precursor. (277 aa)    
Predicted Functional Partners:
FLB_16740
Alpha-xylosidase BoGH31A precursor; Belongs to the glycosyl hydrolase 31 family.
  
  0.940
besA
Ferri-bacillibactin esterase BesA.
 
     0.689
FLB_13830
Cyclomaltodextrinase; Belongs to the glycosyl hydrolase 13 family.
 
  
  0.683
bioF_1
8-amino-7-oxononanoate synthase.
       0.678
ycjG
L-Ala-D/L-Glu epimerase.
       0.678
djlA
DnaJ-like protein DjlA.
       0.564
Your Current Organism:
Flavobacterium succinicans
NCBI taxonomy Id: 29536
Other names: CIP 104744, Cytophaga succinicans, DSM 4002, F. succinicans, Flavobacterium sp. DD5b, Flexibacter succinicans, IFO 14905, JCM 21151, LMG 10402, LMG:10402, NBRC 14905, NCIMB 2277, strain 8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.