STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
neuACMP-N,N'-diacetyllegionaminic acid synthase. (225 aa)    
Predicted Functional Partners:
legI_2
N,N'-diacetyllegionaminic acid synthase.
 
 0.976
legI_1
N,N'-diacetyllegionaminic acid synthase.
 
 0.966
siaA
UDP-N-acetylglucosamine 2-epimerase.
 
  
 0.886
kdsC
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC.
 
  0.811
legG
GDP/UDP-N,N'-diacetylbacillosamine 2-epimerase.
 
  
 0.792
FLB_02050
Hypothetical protein.
       0.566
hisF
Imidazole glycerol phosphate synthase subunit HisF.
      0.559
hddC
D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase.
  
 0.416
Your Current Organism:
Flavobacterium succinicans
NCBI taxonomy Id: 29536
Other names: CIP 104744, Cytophaga succinicans, DSM 4002, F. succinicans, Flavobacterium sp. DD5b, Flexibacter succinicans, IFO 14905, JCM 21151, LMG 10402, LMG:10402, NBRC 14905, NCIMB 2277, strain 8
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