Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| FLB_02990 | queE_1 | FLB_02990 | FLB_02980 | Lipopolysaccharide regulatory protein. | 7-carboxy-7-deazaguanine synthase; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds. | 0.485 |
| FLB_12580 | FLB_18700 | FLB_12580 | FLB_18700 | acyl-CoA reductase (LuxC). | Acyl-protein synthetase, LuxE. | 0.877 |
| FLB_12580 | queE_1 | FLB_12580 | FLB_02980 | acyl-CoA reductase (LuxC). | 7-carboxy-7-deazaguanine synthase; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds. | 0.611 |
| FLB_18700 | FLB_12580 | FLB_18700 | FLB_12580 | Acyl-protein synthetase, LuxE. | acyl-CoA reductase (LuxC). | 0.877 |
| FLB_18700 | queE_1 | FLB_18700 | FLB_02980 | Acyl-protein synthetase, LuxE. | 7-carboxy-7-deazaguanine synthase; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds. | 0.683 |
| FLB_19100 | guaA | FLB_19100 | FLB_07940 | 6-pyruvoyl tetrahydropterin synthase. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.405 |
| FLB_19100 | queD | FLB_19100 | FLB_01700 | 6-pyruvoyl tetrahydropterin synthase. | 6-carboxy-5,6,7,8-tetrahydropterin synthase. | 0.913 |
| FLB_19100 | queE_1 | FLB_19100 | FLB_02980 | 6-pyruvoyl tetrahydropterin synthase. | 7-carboxy-7-deazaguanine synthase; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds. | 0.994 |
| FLB_27660 | nrdD | FLB_27660 | FLB_27670 | Hypothetical protein. | Anaerobic ribonucleoside-triphosphate reductase. | 0.889 |
| FLB_27660 | queE_1 | FLB_27660 | FLB_02980 | Hypothetical protein. | 7-carboxy-7-deazaguanine synthase; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds. | 0.820 |
| guaA | FLB_19100 | FLB_07940 | FLB_19100 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 6-pyruvoyl tetrahydropterin synthase. | 0.405 |
| guaA | purF | FLB_07940 | FLB_19720 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Amidophosphoribosyltransferase. | 0.786 |
| guaA | queD | FLB_07940 | FLB_01700 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 6-carboxy-5,6,7,8-tetrahydropterin synthase. | 0.405 |
| guaA | queE_1 | FLB_07940 | FLB_02980 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 7-carboxy-7-deazaguanine synthase; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds. | 0.466 |
| nrdD | FLB_27660 | FLB_27670 | FLB_27660 | Anaerobic ribonucleoside-triphosphate reductase. | Hypothetical protein. | 0.889 |
| nrdD | queE_1 | FLB_27670 | FLB_02980 | Anaerobic ribonucleoside-triphosphate reductase. | 7-carboxy-7-deazaguanine synthase; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds. | 0.910 |
| purF | guaA | FLB_19720 | FLB_07940 | Amidophosphoribosyltransferase. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.786 |
| purF | queE_1 | FLB_19720 | FLB_02980 | Amidophosphoribosyltransferase. | 7-carboxy-7-deazaguanine synthase; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds. | 0.511 |
| queA | queE_1 | FLB_03130 | FLB_02980 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | 7-carboxy-7-deazaguanine synthase; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds. | 0.690 |
| queD | FLB_19100 | FLB_01700 | FLB_19100 | 6-carboxy-5,6,7,8-tetrahydropterin synthase. | 6-pyruvoyl tetrahydropterin synthase. | 0.913 |
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