STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FLB_04110Hypothetical protein. (206 aa)    
Predicted Functional Partners:
luxQ_3
Autoinducer 2 sensor kinase/phosphatase LuxQ.
  
  
 0.729
luxQ_1
Autoinducer 2 sensor kinase/phosphatase LuxQ.
  
 
 0.679
FLB_09960
Mce related protein.
   
   0.678
FLB_25310
Hypothetical protein.
  
  
 0.624
rpfC_2
Sensory/regulatory protein RpfC.
  
  
 0.580
FLB_04090
Hypothetical protein.
   
  0.534
FLB_04100
Glycine rich protein.
       0.520
FLB_01580
Preprotein translocase subunit YajC.
    
 
 0.490
relA
GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
    
   0.480
FLB_10800
Outer membrane lipoprotein Omp16 precursor.
   
 0.428
Your Current Organism:
Flavobacterium succinicans
NCBI taxonomy Id: 29536
Other names: CIP 104744, Cytophaga succinicans, DSM 4002, F. succinicans, Flavobacterium sp. DD5b, Flexibacter succinicans, IFO 14905, JCM 21151, LMG 10402, LMG:10402, NBRC 14905, NCIMB 2277, strain 8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.